RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 NISCHQ9Y2I1 1504 aa39.26■■■■□ 3.87
LIN54-209ENST00000510557 CCDC180Q9P1Z9 1646 aa33.48■■■□□ 2.95
LIN54-209ENST00000510557 ZCCHC6Q5VYS8 1495 aaKnown RBP33.23■■■□□ 2.91
LIN54-209ENST00000510557 SHROOM4Q9ULL8 1493 aa33.2■■■□□ 2.91
LIN54-209ENST00000510557 SUPT5HO00267 1087 aaKnown RBP32.68■■■□□ 2.82
LIN54-209ENST00000510557 DCAF1Q9Y4B6 1507 aa32.39■■■□□ 2.78
LIN54-209ENST00000510557 DCAF8L2P0C7V8 631 aa32.26■■■□□ 2.76
LIN54-209ENST00000510557 HRCP23327 699 aa31.99■■■□□ 2.71
LIN54-209ENST00000510557 CHIC1Q5VXU3 224 aa31.93■■■□□ 2.7
LIN54-209ENST00000510557 MYO15BQ96JP2 1530 aa31.69■■■□□ 2.66
LIN54-209ENST00000510557 ABCC9O60706 1549 aa31.37■■■□□ 2.61
LIN54-209ENST00000510557 PCGF6Q9BYE7 350 aa31.18■■■□□ 2.58
LIN54-209ENST00000510557 SCRIBQ14160 1630 aa31.13■■■□□ 2.57
LIN54-209ENST00000510557 PPARGC1BQ86YN6 1023 aaKnown RBP31.12■■■□□ 2.57
LIN54-209ENST00000510557 PELP1Q8IZL8 1130 aaKnown RBP31.09■■■□□ 2.57
LIN54-209ENST00000510557 RSF1Q96T23 1441 aaPredicted RBP31.03■■■□□ 2.56
LIN54-209ENST00000510557 NACADO15069 1562 aa30.92■■■□□ 2.54
LIN54-209ENST00000510557 LOC105371045A0A1W2PR82 267 aa30.84■■■□□ 2.53
LIN54-209ENST00000510557 RB1CC1Q8TDY2 1594 aa30.81■■■□□ 2.52
LIN54-209ENST00000510557 TRIM41Q8WV44 630 aa30.6■■■□□ 2.49
LIN54-209ENST00000510557 TRIM26Q12899 539 aaPredicted RBP30.55■■■□□ 2.48
LIN54-209ENST00000510557 CECR2Q9BXF3 1484 aa30.45■■■□□ 2.46
LIN54-209ENST00000510557 MROH2BQ7Z745 1585 aa30.41■■■□□ 2.46
LIN54-209ENST00000510557 WIZO95785 1651 aa30.25■■■□□ 2.43
LIN54-209ENST00000510557 BAZ1AQ9NRL2 1556 aaPredicted RBP30.21■■■□□ 2.43
LIN54-209ENST00000510557 ZEB1P37275 1124 aaPredicted RBP30.2■■■□□ 2.43
LIN54-209ENST00000510557 SCAF1Q9H7N4 1312 aaKnown RBP30.2■■■□□ 2.43
LIN54-209ENST00000510557 FAM9AQ8IZU1 332 aaPredicted RBP30.13■■■□□ 2.41
LIN54-209ENST00000510557 MYT1Q01538 1121 aa29.97■■■□□ 2.39
LIN54-209ENST00000510557 EIF4G1Q04637 1599 aaKnown RBP29.95■■■□□ 2.39
LIN54-209ENST00000510557 TOP2AP11388 1531 aaKnown RBP29.92■■■□□ 2.38
LIN54-209ENST00000510557 SMARCA4P51532 1647 aa29.88■■■□□ 2.37
LIN54-209ENST00000510557 UNC13AQ9UPW8 1703 aa29.77■■■□□ 2.36
LIN54-209ENST00000510557 EHMT2Q96KQ7 1210 aa29.71■■■□□ 2.35
LIN54-209ENST00000510557 CCDC88BA6NC98 1476 aa29.71■■■□□ 2.35
LIN54-209ENST00000510557 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
LIN54-209ENST00000510557 ABCC8Q09428 1581 aa29.54■■■□□ 2.32
LIN54-209ENST00000510557 ACIN1Q9UKV3 1341 aaKnown RBP29.53■■■□□ 2.32
LIN54-209ENST00000510557 EEA1Q15075 1411 aa29.49■■■□□ 2.31
LIN54-209ENST00000510557 WRNQ14191 1432 aaPredicted RBP eCLIP29.42■■■□□ 2.3
LIN54-209ENST00000510557 PEG3Q9GZU2 1588 aa29.4■■■□□ 2.3
LIN54-209ENST00000510557 BICRAQ9NZM4 1560 aa29.39■■■□□ 2.3
LIN54-209ENST00000510557 NEUROD1Q13562 356 aa29.36■■■□□ 2.29
LIN54-209ENST00000510557 TNIKQ9UKE5 1360 aa29.35■■■□□ 2.29
LIN54-209ENST00000510557 CEP162Q5TB80 1403 aa29.31■■■□□ 2.28
LIN54-209ENST00000510557 SOGA1O94964 1423 aa29.3■■■□□ 2.28
LIN54-209ENST00000510557 CSRNP3Q8WYN3 585 aa29.28■■■□□ 2.28
LIN54-209ENST00000510557 PABPN1Q86U42 306 aaKnown RBP eCLIP29.24■■■□□ 2.27
LIN54-209ENST00000510557 CENPBP07199 599 aaPredicted RBP29.23■■■□□ 2.27
LIN54-209ENST00000510557 GTF3C3Q9Y5Q9 886 aa29.22■■■□□ 2.27
LIN54-209ENST00000510557 GOLGA3Q08378 1498 aa29.16■■■□□ 2.26
LIN54-209ENST00000510557 CCER1Q8TC90 406 aaPredicted RBP29.16■■■□□ 2.26
LIN54-209ENST00000510557 UBTFP17480 764 aaKnown RBP29.1■■■□□ 2.25
LIN54-209ENST00000510557 RUSC2Q8N2Y8 1516 aa29.1■■■□□ 2.25
LIN54-209ENST00000510557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.09■■■□□ 2.25
LIN54-209ENST00000510557 ATAD2BQ9ULI0 1458 aa29.07■■■□□ 2.24
LIN54-209ENST00000510557 BAZ1BQ9UIG0 1483 aaKnown RBP29.01■■■□□ 2.24
LIN54-209ENST00000510557 CEP164Q9UPV0 1460 aa29.01■■■□□ 2.23
LIN54-209ENST00000510557 KIF21BO75037 1637 aa28.99■■■□□ 2.23
LIN54-209ENST00000510557 DIEXFQ68CQ4 756 aaKnown RBP28.97■■■□□ 2.23
LIN54-209ENST00000510557 SYNJ1O43426 1573 aa28.97■■■□□ 2.23
LIN54-209ENST00000510557 TTBK1Q5TCY1 1321 aaPredicted RBP28.82■■■□□ 2.2
LIN54-209ENST00000510557 CLIP1P30622 1438 aa28.77■■■□□ 2.2
LIN54-209ENST00000510557 TOP2BQ02880 1626 aa28.73■■■□□ 2.19
LIN54-209ENST00000510557 VPS8Q8N3P4 1428 aa28.7■■■□□ 2.18
LIN54-209ENST00000510557 BIVM-ERCC5R4GMW8 1640 aa28.64■■■□□ 2.18
LIN54-209ENST00000510557 RAPGEF2Q9Y4G8 1499 aa28.63■■■□□ 2.17
LIN54-209ENST00000510557 APLP2Q06481 763 aa28.62■■■□□ 2.17
LIN54-209ENST00000510557 HMGXB3Q12766 1538 aa28.6■■■□□ 2.17
LIN54-209ENST00000510557 NCAPD3P42695 1498 aa28.56■■■□□ 2.16
LIN54-209ENST00000510557 ERICH3Q5RHP9 1530 aa28.54■■■□□ 2.16
LIN54-209ENST00000510557 ZNF316A6NFI3 1004 aaPredicted RBP28.46■■■□□ 2.15
LIN54-209ENST00000510557 PRXQ9BXM0 1461 aa28.45■■■□□ 2.14
LIN54-209ENST00000510557 HNRNPUL2Q1KMD3 747 aaKnown RBP28.41■■■□□ 2.14
LIN54-209ENST00000510557 YTHDC1Q96MU7 727 aaKnown RBP28.39■■■□□ 2.13
LIN54-209ENST00000510557 KIF27Q86VH2 1401 aa28.34■■■□□ 2.13
LIN54-209ENST00000510557 CUX1P39880 1505 aa28.33■■■□□ 2.13
LIN54-209ENST00000510557 CFTRP13569 1480 aa28.33■■■□□ 2.13
LIN54-209ENST00000510557 RANGAP1P46060 587 aaPredicted RBP28.27■■■□□ 2.12
LIN54-209ENST00000510557 ARAP1Q96P48 1450 aa28.25■■■□□ 2.11
LIN54-209ENST00000510557 CLSPNQ9HAW4 1339 aa28.22■■■□□ 2.11
LIN54-209ENST00000510557 PRDM2Q13029 1718 aa28.18■■■□□ 2.1
LIN54-209ENST00000510557 MIER1Q8N108 512 aa28.17■■■□□ 2.1
LIN54-209ENST00000510557 RRBP1Q9P2E9 1410 aaKnown RBP28.06■■■□□ 2.08
LIN54-209ENST00000510557 KANK4Q5T7N3 995 aaPredicted RBP28.02■■■□□ 2.08
LIN54-209ENST00000510557 ARHGAP35Q9NRY4 1499 aa28.02■■■□□ 2.08
LIN54-209ENST00000510557 DHX57Q6P158 1386 aaKnown RBP28■■■□□ 2.07
LIN54-209ENST00000510557 CADPSQ9ULU8 1353 aa27.98■■■□□ 2.07
LIN54-209ENST00000510557 CUX2O14529 1486 aa27.95■■■□□ 2.06
LIN54-209ENST00000510557 IGF1RP08069 1367 aa27.94■■■□□ 2.06
LIN54-209ENST00000510557 MAP3K1Q13233 1512 aa27.91■■■□□ 2.06
LIN54-209ENST00000510557 CCNB3Q8WWL7 1395 aa27.91■■■□□ 2.06
LIN54-209ENST00000510557 ANP32EQ9BTT0 268 aa27.88■■■□□ 2.05
LIN54-209ENST00000510557 SUPT16HQ9Y5B9 1047 aaKnown RBP27.85■■■□□ 2.05
LIN54-209ENST00000510557 CARMIL1Q5VZK9 1371 aa27.84■■■□□ 2.05
LIN54-209ENST00000510557 FGD5Q6ZNL6 1462 aa27.83■■■□□ 2.05
LIN54-209ENST00000510557 BCL11AQ9H165 835 aa27.79■■■□□ 2.04
LIN54-209ENST00000510557 TIAM1Q13009 1591 aa27.78■■■□□ 2.04
LIN54-209ENST00000510557 TSHZ2Q9NRE2 1034 aa27.74■■■□□ 2.03
LIN54-209ENST00000510557 FHAD1B1AJZ9 1412 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms