Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.93■□□□□ 0.3
CHCHD1Q96BP2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHCHD1Q96BP2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHCHD1Q96BP2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.93■□□□□ 0.3
CHCHD1Q96BP2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.93■□□□□ 0.3
CHCHD1Q96BP2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHCHD1Q96BP2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHCHD1Q96BP2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHCHD1Q96BP2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.93■□□□□ 0.3
CHCHD1Q96BP2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.93■□□□□ 0.3
CHCHD1Q96BP2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHCHD1Q96BP2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.92■□□□□ 0.3
CHCHD1Q96BP2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD1Q96BP2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CHCHD1Q96BP2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD1Q96BP2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD1Q96BP2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CHCHD1Q96BP2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD1Q96BP2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHCHD1Q96BP2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD1Q96BP2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD1Q96BP2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD1Q96BP2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHCHD1Q96BP2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.91■□□□□ 0.3
CHCHD1Q96BP2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
CHCHD1Q96BP2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHCHD1Q96BP2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD1Q96BP2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC16.91■□□□□ 0.3
CHCHD1Q96BP2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD1Q96BP2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD1Q96BP2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD1Q96BP2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD1Q96BP2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHCHD1Q96BP2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.9■□□□□ 0.3
CHCHD1Q96BP2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD1Q96BP2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CHCHD1Q96BP2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHCHD1Q96BP2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD1Q96BP2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.9■□□□□ 0.3
CHCHD1Q96BP2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD1Q96BP2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.9■□□□□ 0.3
CHCHD1Q96BP2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CHCHD1Q96BP2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHCHD1Q96BP2 AC110285.7-201ENST00000624417 1536 ntBASIC16.9■□□□□ 0.3
CHCHD1Q96BP2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHCHD1Q96BP2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.9■□□□□ 0.3
CHCHD1Q96BP2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CHCHD1Q96BP2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHCHD1Q96BP2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHCHD1Q96BP2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHCHD1Q96BP2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHCHD1Q96BP2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC16.88■□□□□ 0.29
CHCHD1Q96BP2 AP002365.1-201ENST00000603448 772 ntBASIC16.88■□□□□ 0.29
CHCHD1Q96BP2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHCHD1Q96BP2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHCHD1Q96BP2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHCHD1Q96BP2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHCHD1Q96BP2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHCHD1Q96BP2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHCHD1Q96BP2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHCHD1Q96BP2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CHCHD1Q96BP2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.86■□□□□ 0.29
CHCHD1Q96BP2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.86■□□□□ 0.29
CHCHD1Q96BP2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHCHD1Q96BP2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHCHD1Q96BP2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHCHD1Q96BP2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms