Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
PRPF38AQ8NAV1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PRPF38AQ8NAV1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PRPF38AQ8NAV1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
PRPF38AQ8NAV1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
PRPF38AQ8NAV1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PRPF38AQ8NAV1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.94■■□□□ 1.9
PRPF38AQ8NAV1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.94■■□□□ 1.9
PRPF38AQ8NAV1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.94■■□□□ 1.9
PRPF38AQ8NAV1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.94■■□□□ 1.9
PRPF38AQ8NAV1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PRPF38AQ8NAV1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PRPF38AQ8NAV1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.93■■□□□ 1.9
PRPF38AQ8NAV1 MIR4466-201ENST00000606121 54 ntBASIC26.93■■□□□ 1.9
PRPF38AQ8NAV1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.93■■□□□ 1.9
PRPF38AQ8NAV1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PRPF38AQ8NAV1 SLC6A10P-202ENST00000431994 2058 ntBASIC26.93■■□□□ 1.9
PRPF38AQ8NAV1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
PRPF38AQ8NAV1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
PRPF38AQ8NAV1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PRPF38AQ8NAV1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
PRPF38AQ8NAV1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.91■■□□□ 1.9
PRPF38AQ8NAV1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PRPF38AQ8NAV1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.91■■□□□ 1.9
PRPF38AQ8NAV1 AL512631.2-201ENST00000604634 923 ntBASIC26.91■■□□□ 1.9
PRPF38AQ8NAV1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.91■■□□□ 1.9
PRPF38AQ8NAV1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
PRPF38AQ8NAV1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.91■■□□□ 1.9
PRPF38AQ8NAV1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PRPF38AQ8NAV1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
PRPF38AQ8NAV1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PRPF38AQ8NAV1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PRPF38AQ8NAV1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.9■■□□□ 1.9
PRPF38AQ8NAV1 AC091060.1-201ENST00000623524 1766 ntBASIC26.9■■□□□ 1.9
PRPF38AQ8NAV1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PRPF38AQ8NAV1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
PRPF38AQ8NAV1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.9■■□□□ 1.9
PRPF38AQ8NAV1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PRPF38AQ8NAV1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.89■■□□□ 1.9
PRPF38AQ8NAV1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PRPF38AQ8NAV1 AL139246.5-201ENST00000606645 996 ntBASIC26.89■■□□□ 1.9
PRPF38AQ8NAV1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.89■■□□□ 1.9
PRPF38AQ8NAV1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
PRPF38AQ8NAV1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
PRPF38AQ8NAV1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
PRPF38AQ8NAV1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
PRPF38AQ8NAV1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PRPF38AQ8NAV1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.88■■□□□ 1.89
PRPF38AQ8NAV1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.88■■□□□ 1.89
PRPF38AQ8NAV1 AC004448.1-201ENST00000458332 883 ntBASIC26.88■■□□□ 1.89
PRPF38AQ8NAV1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.88■■□□□ 1.89
PRPF38AQ8NAV1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PRPF38AQ8NAV1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.88■■□□□ 1.89
PRPF38AQ8NAV1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PRPF38AQ8NAV1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.88■■□□□ 1.89
PRPF38AQ8NAV1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PRPF38AQ8NAV1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
PRPF38AQ8NAV1 AC145676.1-201ENST00000514988 2004 ntBASIC26.87■■□□□ 1.89
PRPF38AQ8NAV1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.87■■□□□ 1.89
PRPF38AQ8NAV1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.87■■□□□ 1.89
PRPF38AQ8NAV1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.87■■□□□ 1.89
PRPF38AQ8NAV1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.87■■□□□ 1.89
PRPF38AQ8NAV1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PRPF38AQ8NAV1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.86■■□□□ 1.89
PRPF38AQ8NAV1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PRPF38AQ8NAV1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.86■■□□□ 1.89
PRPF38AQ8NAV1 MIR638-201ENST00000385237 100 ntBASIC26.86■■□□□ 1.89
PRPF38AQ8NAV1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PRPF38AQ8NAV1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
PRPF38AQ8NAV1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PRPF38AQ8NAV1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.86■■□□□ 1.89
PRPF38AQ8NAV1 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.86■■□□□ 1.89
PRPF38AQ8NAV1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
PRPF38AQ8NAV1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
PRPF38AQ8NAV1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PRPF38AQ8NAV1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.85■■□□□ 1.89
PRPF38AQ8NAV1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.85■■□□□ 1.89
PRPF38AQ8NAV1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.85■■□□□ 1.89
PRPF38AQ8NAV1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.85■■□□□ 1.89
PRPF38AQ8NAV1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PRPF38AQ8NAV1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PRPF38AQ8NAV1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PRPF38AQ8NAV1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PRPF38AQ8NAV1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PRPF38AQ8NAV1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PRPF38AQ8NAV1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PRPF38AQ8NAV1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.83■■□□□ 1.89
PRPF38AQ8NAV1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PRPF38AQ8NAV1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PRPF38AQ8NAV1 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.83■■□□□ 1.89
PRPF38AQ8NAV1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.83■■□□□ 1.89
PRPF38AQ8NAV1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
PRPF38AQ8NAV1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
PRPF38AQ8NAV1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.81■■□□□ 1.88
PRPF38AQ8NAV1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PRPF38AQ8NAV1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
PRPF38AQ8NAV1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PRPF38AQ8NAV1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.81■■□□□ 1.88
PRPF38AQ8NAV1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PRPF38AQ8NAV1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms