Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SPDEFO95238 AP003733.4-201ENST00000623785 1697 ntBASIC19.55■□□□□ 0.72
SPDEFO95238 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPDEFO95238 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPDEFO95238 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPDEFO95238 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.55■□□□□ 0.72
SPDEFO95238 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SPDEFO95238 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SPDEFO95238 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPDEFO95238 AL359504.2-201ENST00000605506 1601 ntBASIC19.54■□□□□ 0.72
SPDEFO95238 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPDEFO95238 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPDEFO95238 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.54■□□□□ 0.72
SPDEFO95238 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPDEFO95238 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPDEFO95238 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPDEFO95238 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.54■□□□□ 0.72
SPDEFO95238 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPDEFO95238 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.53■□□□□ 0.72
SPDEFO95238 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SPDEFO95238 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.53■□□□□ 0.72
SPDEFO95238 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SPDEFO95238 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SPDEFO95238 MIR4449-201ENST00000578365 66 ntBASIC19.53■□□□□ 0.72
SPDEFO95238 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.53■□□□□ 0.72
SPDEFO95238 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPDEFO95238 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.53■□□□□ 0.72
SPDEFO95238 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SPDEFO95238 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPDEFO95238 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPDEFO95238 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.52■□□□□ 0.72
SPDEFO95238 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPDEFO95238 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.52■□□□□ 0.72
SPDEFO95238 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPDEFO95238 AC060814.1-201ENST00000554326 538 ntBASIC19.52■□□□□ 0.72
SPDEFO95238 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SPDEFO95238 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPDEFO95238 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPDEFO95238 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPDEFO95238 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SPDEFO95238 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SPDEFO95238 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SPDEFO95238 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SPDEFO95238 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPDEFO95238 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPDEFO95238 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.51■□□□□ 0.71
SPDEFO95238 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPDEFO95238 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPDEFO95238 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
SPDEFO95238 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SPDEFO95238 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPDEFO95238 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.5■□□□□ 0.71
SPDEFO95238 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPDEFO95238 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SPDEFO95238 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPDEFO95238 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPDEFO95238 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPDEFO95238 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPDEFO95238 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPDEFO95238 EP400NL-214ENST00000641289 2402 ntBASIC19.49■□□□□ 0.71
SPDEFO95238 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPDEFO95238 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPDEFO95238 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPDEFO95238 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPDEFO95238 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SPDEFO95238 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPDEFO95238 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPDEFO95238 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SPDEFO95238 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPDEFO95238 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPDEFO95238 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPDEFO95238 AL157400.5-201ENST00000507624 621 ntBASIC19.48■□□□□ 0.71
SPDEFO95238 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPDEFO95238 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPDEFO95238 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPDEFO95238 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SPDEFO95238 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPDEFO95238 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPDEFO95238 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPDEFO95238 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPDEFO95238 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SPDEFO95238 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPDEFO95238 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPDEFO95238 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPDEFO95238 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPDEFO95238 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPDEFO95238 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPDEFO95238 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.47■□□□□ 0.71
SPDEFO95238 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPDEFO95238 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPDEFO95238 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPDEFO95238 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPDEFO95238 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPDEFO95238 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPDEFO95238 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPDEFO95238 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPDEFO95238 ABCB10P4-201ENST00000566803 2184 ntBASIC19.46■□□□□ 0.71
SPDEFO95238 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.46■□□□□ 0.71
SPDEFO95238 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
SPDEFO95238 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms