Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
SPDYE3A6NKU9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SPDYE3A6NKU9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
SPDYE3A6NKU9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SPDYE3A6NKU9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SPDYE3A6NKU9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SPDYE3A6NKU9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SPDYE3A6NKU9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.54■■□□□ 1.84
SPDYE3A6NKU9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.53■■□□□ 1.84
SPDYE3A6NKU9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SPDYE3A6NKU9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SPDYE3A6NKU9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.53■■□□□ 1.84
SPDYE3A6NKU9 UNC93B8-201ENST00000511903 705 ntBASIC26.53■■□□□ 1.84
SPDYE3A6NKU9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.53■■□□□ 1.84
SPDYE3A6NKU9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
SPDYE3A6NKU9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.53■■□□□ 1.84
SPDYE3A6NKU9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.53■■□□□ 1.84
SPDYE3A6NKU9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SPDYE3A6NKU9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SPDYE3A6NKU9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SPDYE3A6NKU9 AL356441.2-201ENST00000443009 864 ntBASIC26.52■■□□□ 1.84
SPDYE3A6NKU9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
SPDYE3A6NKU9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
SPDYE3A6NKU9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.51■■□□□ 1.84
SPDYE3A6NKU9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.51■■□□□ 1.83
SPDYE3A6NKU9 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.51■■□□□ 1.83
SPDYE3A6NKU9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.51■■□□□ 1.83
SPDYE3A6NKU9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SPDYE3A6NKU9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SPDYE3A6NKU9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SPDYE3A6NKU9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SPDYE3A6NKU9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.5■■□□□ 1.83
SPDYE3A6NKU9 AC020928.2-201ENST00000588717 2197 ntBASIC26.5■■□□□ 1.83
SPDYE3A6NKU9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SPDYE3A6NKU9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SPDYE3A6NKU9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.5■■□□□ 1.83
SPDYE3A6NKU9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.5■■□□□ 1.83
SPDYE3A6NKU9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
SPDYE3A6NKU9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.5■■□□□ 1.83
SPDYE3A6NKU9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SPDYE3A6NKU9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
SPDYE3A6NKU9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SPDYE3A6NKU9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.49■■□□□ 1.83
SPDYE3A6NKU9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SPDYE3A6NKU9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
SPDYE3A6NKU9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SPDYE3A6NKU9 KRT16P3-201ENST00000439127 1283 ntBASIC26.49■■□□□ 1.83
SPDYE3A6NKU9 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.49■■□□□ 1.83
SPDYE3A6NKU9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.49■■□□□ 1.83
SPDYE3A6NKU9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SPDYE3A6NKU9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SPDYE3A6NKU9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SPDYE3A6NKU9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.48■■□□□ 1.83
SPDYE3A6NKU9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.48■■□□□ 1.83
SPDYE3A6NKU9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.48■■□□□ 1.83
SPDYE3A6NKU9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SPDYE3A6NKU9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
SPDYE3A6NKU9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SPDYE3A6NKU9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SPDYE3A6NKU9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SPDYE3A6NKU9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
SPDYE3A6NKU9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
SPDYE3A6NKU9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.47■■□□□ 1.83
SPDYE3A6NKU9 MTDHP2-201ENST00000601468 714 ntBASIC26.47■■□□□ 1.83
SPDYE3A6NKU9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SPDYE3A6NKU9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SPDYE3A6NKU9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SPDYE3A6NKU9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SPDYE3A6NKU9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SPDYE3A6NKU9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SPDYE3A6NKU9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
SPDYE3A6NKU9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SPDYE3A6NKU9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.46■■□□□ 1.83
SPDYE3A6NKU9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.46■■□□□ 1.83
SPDYE3A6NKU9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SPDYE3A6NKU9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SPDYE3A6NKU9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
SPDYE3A6NKU9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SPDYE3A6NKU9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SPDYE3A6NKU9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SPDYE3A6NKU9 AC142381.3-201ENST00000568208 1670 ntBASIC26.44■■□□□ 1.82
SPDYE3A6NKU9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
SPDYE3A6NKU9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
SPDYE3A6NKU9 AC010997.5-201ENST00000609182 354 ntBASIC26.44■■□□□ 1.82
SPDYE3A6NKU9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.44■■□□□ 1.82
SPDYE3A6NKU9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.44■■□□□ 1.82
SPDYE3A6NKU9 AP003733.4-201ENST00000623785 1697 ntBASIC26.44■■□□□ 1.82
SPDYE3A6NKU9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SPDYE3A6NKU9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
SPDYE3A6NKU9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.43■■□□□ 1.82
SPDYE3A6NKU9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.43■■□□□ 1.82
SPDYE3A6NKU9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.43■■□□□ 1.82
SPDYE3A6NKU9 SNX5-217ENST00000606557 1087 ntBASIC26.43■■□□□ 1.82
SPDYE3A6NKU9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.43■■□□□ 1.82
SPDYE3A6NKU9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.43■■□□□ 1.82
SPDYE3A6NKU9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SPDYE3A6NKU9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
SPDYE3A6NKU9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SPDYE3A6NKU9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SPDYE3A6NKU9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms