Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19■□□□□ 0.63
RCL1Q9Y2P8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.99■□□□□ 0.63
RCL1Q9Y2P8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.99■□□□□ 0.63
RCL1Q9Y2P8 AL117328.2-201ENST00000624617 1940 ntBASIC18.99■□□□□ 0.63
RCL1Q9Y2P8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.99■□□□□ 0.63
RCL1Q9Y2P8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.99■□□□□ 0.63
RCL1Q9Y2P8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCL1Q9Y2P8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RCL1Q9Y2P8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RCL1Q9Y2P8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RCL1Q9Y2P8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.98■□□□□ 0.63
RCL1Q9Y2P8 AL162393.1-201ENST00000437852 946 ntBASIC18.98■□□□□ 0.63
RCL1Q9Y2P8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
RCL1Q9Y2P8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RCL1Q9Y2P8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RCL1Q9Y2P8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RCL1Q9Y2P8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.98■□□□□ 0.63
RCL1Q9Y2P8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RCL1Q9Y2P8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RCL1Q9Y2P8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RCL1Q9Y2P8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
RCL1Q9Y2P8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RCL1Q9Y2P8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCL1Q9Y2P8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCL1Q9Y2P8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCL1Q9Y2P8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RCL1Q9Y2P8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RCL1Q9Y2P8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RCL1Q9Y2P8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RCL1Q9Y2P8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RCL1Q9Y2P8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.97■□□□□ 0.63
RCL1Q9Y2P8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RCL1Q9Y2P8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCL1Q9Y2P8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCL1Q9Y2P8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCL1Q9Y2P8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCL1Q9Y2P8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCL1Q9Y2P8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCL1Q9Y2P8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCL1Q9Y2P8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.96■□□□□ 0.63
RCL1Q9Y2P8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RCL1Q9Y2P8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCL1Q9Y2P8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RCL1Q9Y2P8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RCL1Q9Y2P8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RCL1Q9Y2P8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RCL1Q9Y2P8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RCL1Q9Y2P8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RCL1Q9Y2P8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.95■□□□□ 0.62
RCL1Q9Y2P8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.95■□□□□ 0.62
RCL1Q9Y2P8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RCL1Q9Y2P8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RCL1Q9Y2P8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RCL1Q9Y2P8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RCL1Q9Y2P8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RCL1Q9Y2P8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCL1Q9Y2P8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RCL1Q9Y2P8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RCL1Q9Y2P8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RCL1Q9Y2P8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.93■□□□□ 0.62
RCL1Q9Y2P8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.93■□□□□ 0.62
RCL1Q9Y2P8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RCL1Q9Y2P8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RCL1Q9Y2P8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RCL1Q9Y2P8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RCL1Q9Y2P8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.92■□□□□ 0.62
RCL1Q9Y2P8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RCL1Q9Y2P8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RCL1Q9Y2P8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RCL1Q9Y2P8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
RCL1Q9Y2P8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RCL1Q9Y2P8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.92■□□□□ 0.62
RCL1Q9Y2P8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 DUX4L13-201ENST00000554103 1267 ntBASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 DUX4L15-201ENST00000611059 1267 ntBASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 DUX4L23-201ENST00000615195 1269 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms