Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.18■□□□□ 0.98
SNRNP40Q96DI7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.18■□□□□ 0.98
SNRNP40Q96DI7 EDA-201ENST00000338901 1233 ntBASIC21.17■□□□□ 0.98
SNRNP40Q96DI7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SNRNP40Q96DI7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
SNRNP40Q96DI7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.17■□□□□ 0.98
SNRNP40Q96DI7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.17■□□□□ 0.98
SNRNP40Q96DI7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNRNP40Q96DI7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.17■□□□□ 0.98
SNRNP40Q96DI7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNRNP40Q96DI7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNRNP40Q96DI7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNRNP40Q96DI7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.16■□□□□ 0.98
SNRNP40Q96DI7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNRNP40Q96DI7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SNRNP40Q96DI7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNRNP40Q96DI7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.16■□□□□ 0.98
SNRNP40Q96DI7 AC024257.2-201ENST00000549699 147 ntBASIC21.16■□□□□ 0.98
SNRNP40Q96DI7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SNRNP40Q96DI7 AL355001.2-201ENST00000620617 1191 ntBASIC21.16■□□□□ 0.98
SNRNP40Q96DI7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNRNP40Q96DI7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNRNP40Q96DI7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNRNP40Q96DI7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNRNP40Q96DI7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.15■□□□□ 0.98
SNRNP40Q96DI7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNRNP40Q96DI7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.15■□□□□ 0.98
SNRNP40Q96DI7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
SNRNP40Q96DI7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNRNP40Q96DI7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SNRNP40Q96DI7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNRNP40Q96DI7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.14■□□□□ 0.97
SNRNP40Q96DI7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNRNP40Q96DI7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNRNP40Q96DI7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNRNP40Q96DI7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNRNP40Q96DI7 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.13■□□□□ 0.97
SNRNP40Q96DI7 MIR5787-201ENST00000611784 55 ntBASIC21.13■□□□□ 0.97
SNRNP40Q96DI7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNRNP40Q96DI7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNRNP40Q96DI7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRNP40Q96DI7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRNP40Q96DI7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNRNP40Q96DI7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.11■□□□□ 0.97
SNRNP40Q96DI7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNRNP40Q96DI7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SNRNP40Q96DI7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRNP40Q96DI7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNRNP40Q96DI7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
SNRNP40Q96DI7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNRNP40Q96DI7 AC104564.3-201ENST00000582367 638 ntBASIC21.11■□□□□ 0.97
SNRNP40Q96DI7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNRNP40Q96DI7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.1■□□□□ 0.97
SNRNP40Q96DI7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.1■□□□□ 0.97
SNRNP40Q96DI7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.1■□□□□ 0.97
SNRNP40Q96DI7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.1■□□□□ 0.97
SNRNP40Q96DI7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNRNP40Q96DI7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
SNRNP40Q96DI7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SNRNP40Q96DI7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.1■□□□□ 0.97
SNRNP40Q96DI7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNRNP40Q96DI7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SNRNP40Q96DI7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNRNP40Q96DI7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.09■□□□□ 0.97
SNRNP40Q96DI7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNRNP40Q96DI7 AC105265.2-201ENST00000467189 838 ntBASIC21.09■□□□□ 0.97
SNRNP40Q96DI7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SNRNP40Q96DI7 AL136967.2-201ENST00000623968 743 ntBASIC21.09■□□□□ 0.97
SNRNP40Q96DI7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNRNP40Q96DI7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SNRNP40Q96DI7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNRNP40Q96DI7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNRNP40Q96DI7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNRNP40Q96DI7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SNRNP40Q96DI7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SNRNP40Q96DI7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.08■□□□□ 0.97
SNRNP40Q96DI7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
SNRNP40Q96DI7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNRNP40Q96DI7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNRNP40Q96DI7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SNRNP40Q96DI7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.07■□□□□ 0.96
SNRNP40Q96DI7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SNRNP40Q96DI7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.07■□□□□ 0.96
SNRNP40Q96DI7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNRNP40Q96DI7 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.07■□□□□ 0.96
SNRNP40Q96DI7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNRNP40Q96DI7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SNRNP40Q96DI7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.06■□□□□ 0.96
SNRNP40Q96DI7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNRNP40Q96DI7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.06■□□□□ 0.96
SNRNP40Q96DI7 AF213884.3-201ENST00000563833 479 ntBASIC21.06■□□□□ 0.96
SNRNP40Q96DI7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNRNP40Q96DI7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNRNP40Q96DI7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.05■□□□□ 0.96
SNRNP40Q96DI7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNRNP40Q96DI7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.05■□□□□ 0.96
SNRNP40Q96DI7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.05■□□□□ 0.96
SNRNP40Q96DI7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.05■□□□□ 0.96
SNRNP40Q96DI7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SNRNP40Q96DI7 AC142086.6-201ENST00000621154 1765 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms