Protein–RNA interactions for Protein: A0A0K0K1B3

TRBV30, T-cell receptor beta variable 30 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV30A0A0K0K1B3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV30A0A0K0K1B3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV30A0A0K0K1B3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV30A0A0K0K1B3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRBV30A0A0K0K1B3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
TRBV30A0A0K0K1B3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRBV30A0A0K0K1B3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV30A0A0K0K1B3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV30A0A0K0K1B3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC15.77■□□□□ 0.12
TRBV30A0A0K0K1B3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV30A0A0K0K1B3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV30A0A0K0K1B3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV30A0A0K0K1B3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV30A0A0K0K1B3 CR559946.2-201ENST00000623684 991 ntBASIC15.77■□□□□ 0.12
TRBV30A0A0K0K1B3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRBV30A0A0K0K1B3 AC141586.4-201ENST00000624558 1573 ntBASIC15.77■□□□□ 0.11
TRBV30A0A0K0K1B3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV30A0A0K0K1B3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV30A0A0K0K1B3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV30A0A0K0K1B3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TRBV30A0A0K0K1B3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV30A0A0K0K1B3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV30A0A0K0K1B3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV30A0A0K0K1B3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV30A0A0K0K1B3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV30A0A0K0K1B3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV30A0A0K0K1B3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV30A0A0K0K1B3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV30A0A0K0K1B3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.76■□□□□ 0.11
TRBV30A0A0K0K1B3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV30A0A0K0K1B3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
TRBV30A0A0K0K1B3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV30A0A0K0K1B3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV30A0A0K0K1B3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV30A0A0K0K1B3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV30A0A0K0K1B3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV30A0A0K0K1B3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRBV30A0A0K0K1B3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV30A0A0K0K1B3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV30A0A0K0K1B3 MED25-210ENST00000612854 801 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV30A0A0K0K1B3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV30A0A0K0K1B3 MED25-214ENST00000622402 642 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV30A0A0K0K1B3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV30A0A0K0K1B3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV30A0A0K0K1B3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC15.75■□□□□ 0.11
TRBV30A0A0K0K1B3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV30A0A0K0K1B3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV30A0A0K0K1B3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
TRBV30A0A0K0K1B3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV30A0A0K0K1B3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV30A0A0K0K1B3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC15.74■□□□□ 0.11
TRBV30A0A0K0K1B3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV30A0A0K0K1B3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV30A0A0K0K1B3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV30A0A0K0K1B3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV30A0A0K0K1B3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRBV30A0A0K0K1B3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV30A0A0K0K1B3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV30A0A0K0K1B3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRBV30A0A0K0K1B3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV30A0A0K0K1B3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC15.73■□□□□ 0.11
TRBV30A0A0K0K1B3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV30A0A0K0K1B3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV30A0A0K0K1B3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC15.73■□□□□ 0.11
TRBV30A0A0K0K1B3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
TRBV30A0A0K0K1B3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRBV30A0A0K0K1B3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 ABHD17AP4-201ENST00000411545 909 ntBASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 MIR3648-2-201ENST00000581792 180 ntBASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 MIR3648-1-201ENST00000615959 180 ntBASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.72■□□□□ 0.11
TRBV30A0A0K0K1B3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRBV30A0A0K0K1B3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms