Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
CYP46A1Q9Y6A2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CYP46A1Q9Y6A2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.83■■■□□ 2.05
CYP46A1Q9Y6A2 LINC00543-201ENST00000567234 1845 ntBASIC27.83■■■□□ 2.05
CYP46A1Q9Y6A2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
CYP46A1Q9Y6A2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CYP46A1Q9Y6A2 DUX4L9-201ENST00000449051 1259 ntBASIC27.82■■■□□ 2.04
CYP46A1Q9Y6A2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
CYP46A1Q9Y6A2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CYP46A1Q9Y6A2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CYP46A1Q9Y6A2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CYP46A1Q9Y6A2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.81■■■□□ 2.04
CYP46A1Q9Y6A2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
CYP46A1Q9Y6A2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
CYP46A1Q9Y6A2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.81■■■□□ 2.04
CYP46A1Q9Y6A2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.81■■■□□ 2.04
CYP46A1Q9Y6A2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CYP46A1Q9Y6A2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC27.8■■■□□ 2.04
CYP46A1Q9Y6A2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC27.8■■■□□ 2.04
CYP46A1Q9Y6A2 MIR6765-201ENST00000614092 87 ntBASIC27.8■■■□□ 2.04
CYP46A1Q9Y6A2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CYP46A1Q9Y6A2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.8■■■□□ 2.04
CYP46A1Q9Y6A2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CYP46A1Q9Y6A2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CYP46A1Q9Y6A2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CYP46A1Q9Y6A2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CYP46A1Q9Y6A2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CYP46A1Q9Y6A2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CYP46A1Q9Y6A2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CYP46A1Q9Y6A2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CYP46A1Q9Y6A2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CYP46A1Q9Y6A2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CYP46A1Q9Y6A2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CYP46A1Q9Y6A2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CYP46A1Q9Y6A2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.79■■■□□ 2.04
CYP46A1Q9Y6A2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CYP46A1Q9Y6A2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.79■■■□□ 2.04
CYP46A1Q9Y6A2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CYP46A1Q9Y6A2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
CYP46A1Q9Y6A2 AC087393.1-201ENST00000582896 145 ntBASIC27.78■■■□□ 2.04
CYP46A1Q9Y6A2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC27.78■■■□□ 2.04
CYP46A1Q9Y6A2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC27.78■■■□□ 2.04
CYP46A1Q9Y6A2 AC141586.4-201ENST00000624558 1573 ntBASIC27.77■■■□□ 2.04
CYP46A1Q9Y6A2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CYP46A1Q9Y6A2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CYP46A1Q9Y6A2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
CYP46A1Q9Y6A2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
CYP46A1Q9Y6A2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CYP46A1Q9Y6A2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.77■■■□□ 2.04
CYP46A1Q9Y6A2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
CYP46A1Q9Y6A2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
CYP46A1Q9Y6A2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.76■■■□□ 2.03
CYP46A1Q9Y6A2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CYP46A1Q9Y6A2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC27.76■■■□□ 2.03
CYP46A1Q9Y6A2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.03
CYP46A1Q9Y6A2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.76■■■□□ 2.03
CYP46A1Q9Y6A2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.76■■■□□ 2.03
CYP46A1Q9Y6A2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC27.76■■■□□ 2.03
CYP46A1Q9Y6A2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
CYP46A1Q9Y6A2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
CYP46A1Q9Y6A2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
CYP46A1Q9Y6A2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CYP46A1Q9Y6A2 AC129492.7-201ENST00000622992 756 ntBASIC27.75■■■□□ 2.03
CYP46A1Q9Y6A2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC27.75■■■□□ 2.03
CYP46A1Q9Y6A2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CYP46A1Q9Y6A2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CYP46A1Q9Y6A2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CYP46A1Q9Y6A2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CYP46A1Q9Y6A2 KRT18P60-201ENST00000312876 1297 ntBASIC27.74■■■□□ 2.03
CYP46A1Q9Y6A2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CYP46A1Q9Y6A2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CYP46A1Q9Y6A2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CYP46A1Q9Y6A2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CYP46A1Q9Y6A2 HLA-L-211ENST00000482052 1765 ntBASIC27.73■■■□□ 2.03
CYP46A1Q9Y6A2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CYP46A1Q9Y6A2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.73■■■□□ 2.03
CYP46A1Q9Y6A2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC27.73■■■□□ 2.03
CYP46A1Q9Y6A2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CYP46A1Q9Y6A2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.73■■■□□ 2.03
CYP46A1Q9Y6A2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
CYP46A1Q9Y6A2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CYP46A1Q9Y6A2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
CYP46A1Q9Y6A2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
CYP46A1Q9Y6A2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CYP46A1Q9Y6A2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CYP46A1Q9Y6A2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CYP46A1Q9Y6A2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.72■■■□□ 2.03
CYP46A1Q9Y6A2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC27.72■■■□□ 2.03
CYP46A1Q9Y6A2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CYP46A1Q9Y6A2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CYP46A1Q9Y6A2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CYP46A1Q9Y6A2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CYP46A1Q9Y6A2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CYP46A1Q9Y6A2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CYP46A1Q9Y6A2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.71■■■□□ 2.03
CYP46A1Q9Y6A2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC27.71■■■□□ 2.03
CYP46A1Q9Y6A2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
CYP46A1Q9Y6A2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
CYP46A1Q9Y6A2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
CYP46A1Q9Y6A2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms