Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.76
RIMBP3Q9UFD9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC38.51■■■■□ 3.76
RIMBP3Q9UFD9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC38.51■■■■□ 3.75
RIMBP3Q9UFD9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC38.5■■■■□ 3.75
RIMBP3Q9UFD9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC38.5■■■■□ 3.75
RIMBP3Q9UFD9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
RIMBP3Q9UFD9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC38.49■■■■□ 3.75
RIMBP3Q9UFD9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC38.49■■■■□ 3.75
RIMBP3Q9UFD9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC38.49■■■■□ 3.75
RIMBP3Q9UFD9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC38.49■■■■□ 3.75
RIMBP3Q9UFD9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
RIMBP3Q9UFD9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC38.49■■■■□ 3.75
RIMBP3Q9UFD9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC38.49■■■■□ 3.75
RIMBP3Q9UFD9 MIR6722-201ENST00000617286 78 ntBASIC38.49■■■■□ 3.75
RIMBP3Q9UFD9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC38.48■■■■□ 3.75
RIMBP3Q9UFD9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC38.48■■■■□ 3.75
RIMBP3Q9UFD9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC38.48■■■■□ 3.75
RIMBP3Q9UFD9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC38.48■■■■□ 3.75
RIMBP3Q9UFD9 YBX1P1-201ENST00000445822 960 ntBASIC38.47■■■■□ 3.75
RIMBP3Q9UFD9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC38.47■■■■□ 3.75
RIMBP3Q9UFD9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
RIMBP3Q9UFD9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC38.47■■■■□ 3.75
RIMBP3Q9UFD9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC38.46■■■■□ 3.75
RIMBP3Q9UFD9 AC008764.7-201ENST00000593779 1081 ntBASIC38.46■■■■□ 3.75
RIMBP3Q9UFD9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC38.46■■■■□ 3.75
RIMBP3Q9UFD9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.75
RIMBP3Q9UFD9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC38.45■■■■□ 3.75
RIMBP3Q9UFD9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC38.45■■■■□ 3.75
RIMBP3Q9UFD9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.75
RIMBP3Q9UFD9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC38.45■■■■□ 3.75
RIMBP3Q9UFD9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
RIMBP3Q9UFD9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC38.44■■■■□ 3.74
RIMBP3Q9UFD9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC38.43■■■■□ 3.74
RIMBP3Q9UFD9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC38.43■■■■□ 3.74
RIMBP3Q9UFD9 TMEM191A-211ENST00000637163 1067 ntBASIC38.43■■■■□ 3.74
RIMBP3Q9UFD9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
RIMBP3Q9UFD9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC38.42■■■■□ 3.74
RIMBP3Q9UFD9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC38.42■■■■□ 3.74
RIMBP3Q9UFD9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC38.42■■■■□ 3.74
RIMBP3Q9UFD9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC38.42■■■■□ 3.74
RIMBP3Q9UFD9 SYT6-210ENST00000641643 1587 ntBASIC38.42■■■■□ 3.74
RIMBP3Q9UFD9 SERBP1P1-201ENST00000396021 1160 ntBASIC38.41■■■■□ 3.74
RIMBP3Q9UFD9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC38.41■■■■□ 3.74
RIMBP3Q9UFD9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC38.41■■■■□ 3.74
RIMBP3Q9UFD9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC38.41■■■■□ 3.74
RIMBP3Q9UFD9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
RIMBP3Q9UFD9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
RIMBP3Q9UFD9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC38.41■■■■□ 3.74
RIMBP3Q9UFD9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC38.4■■■■□ 3.74
RIMBP3Q9UFD9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
RIMBP3Q9UFD9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC38.39■■■■□ 3.74
RIMBP3Q9UFD9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC38.39■■■■□ 3.74
RIMBP3Q9UFD9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC38.39■■■■□ 3.74
RIMBP3Q9UFD9 PTCHD3P2-201ENST00000424937 1205 ntBASIC38.38■■■■□ 3.74
RIMBP3Q9UFD9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
RIMBP3Q9UFD9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC38.38■■■■□ 3.73
RIMBP3Q9UFD9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC38.38■■■■□ 3.73
RIMBP3Q9UFD9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC38.38■■■■□ 3.73
RIMBP3Q9UFD9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC38.37■■■■□ 3.73
RIMBP3Q9UFD9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC38.37■■■■□ 3.73
RIMBP3Q9UFD9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
RIMBP3Q9UFD9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC38.36■■■■□ 3.73
RIMBP3Q9UFD9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
RIMBP3Q9UFD9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC38.36■■■■□ 3.73
RIMBP3Q9UFD9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC38.36■■■■□ 3.73
RIMBP3Q9UFD9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
RIMBP3Q9UFD9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC38.35■■■■□ 3.73
RIMBP3Q9UFD9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC38.34■■■■□ 3.73
RIMBP3Q9UFD9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC38.34■■■■□ 3.73
RIMBP3Q9UFD9 AC011298.3-201ENST00000615796 283 ntBASIC38.34■■■■□ 3.73
RIMBP3Q9UFD9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC38.34■■■■□ 3.73
RIMBP3Q9UFD9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC38.34■■■■□ 3.73
RIMBP3Q9UFD9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC38.34■■■■□ 3.73
RIMBP3Q9UFD9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC38.34■■■■□ 3.73
RIMBP3Q9UFD9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC38.34■■■■□ 3.73
RIMBP3Q9UFD9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC38.34■■■■□ 3.73
RIMBP3Q9UFD9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC38.33■■■■□ 3.73
RIMBP3Q9UFD9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC38.33■■■■□ 3.73
RIMBP3Q9UFD9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
RIMBP3Q9UFD9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC38.33■■■■□ 3.73
RIMBP3Q9UFD9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC38.33■■■■□ 3.73
RIMBP3Q9UFD9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC38.33■■■■□ 3.73
RIMBP3Q9UFD9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
RIMBP3Q9UFD9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC38.32■■■■□ 3.73
RIMBP3Q9UFD9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC38.32■■■■□ 3.73
RIMBP3Q9UFD9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC38.32■■■■□ 3.73
RIMBP3Q9UFD9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC38.32■■■■□ 3.73
RIMBP3Q9UFD9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC38.32■■■■□ 3.72
RIMBP3Q9UFD9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC38.31■■■■□ 3.72
RIMBP3Q9UFD9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC38.3■■■■□ 3.72
RIMBP3Q9UFD9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC38.3■■■■□ 3.72
RIMBP3Q9UFD9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC38.3■■■■□ 3.72
RIMBP3Q9UFD9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC38.3■■■■□ 3.72
RIMBP3Q9UFD9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC38.3■■■■□ 3.72
RIMBP3Q9UFD9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC38.3■■■■□ 3.72
RIMBP3Q9UFD9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC38.3■■■■□ 3.72
RIMBP3Q9UFD9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
RIMBP3Q9UFD9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
RIMBP3Q9UFD9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC38.29■■■■□ 3.72
RIMBP3Q9UFD9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms