Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.41■■□□□ 1.98
EFCC1Q9HA90 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
EFCC1Q9HA90 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
EFCC1Q9HA90 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
EFCC1Q9HA90 AL031432.3-201ENST00000607698 485 ntBASIC27.41■■□□□ 1.98
EFCC1Q9HA90 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
EFCC1Q9HA90 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
EFCC1Q9HA90 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
EFCC1Q9HA90 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
EFCC1Q9HA90 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC27.4■■□□□ 1.98
EFCC1Q9HA90 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC27.4■■□□□ 1.98
EFCC1Q9HA90 PARL-206ENST00000435888 1098 ntTSL 5 BASIC27.4■■□□□ 1.98
EFCC1Q9HA90 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.4■■□□□ 1.98
EFCC1Q9HA90 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
EFCC1Q9HA90 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
EFCC1Q9HA90 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.39■■□□□ 1.98
EFCC1Q9HA90 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.39■■□□□ 1.98
EFCC1Q9HA90 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.39■■□□□ 1.98
EFCC1Q9HA90 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
EFCC1Q9HA90 UNC93B3-201ENST00000308076 687 ntBASIC27.39■■□□□ 1.98
EFCC1Q9HA90 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC27.39■■□□□ 1.98
EFCC1Q9HA90 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC27.39■■□□□ 1.97
EFCC1Q9HA90 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.38■■□□□ 1.97
EFCC1Q9HA90 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
EFCC1Q9HA90 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC27.38■■□□□ 1.97
EFCC1Q9HA90 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC27.38■■□□□ 1.97
EFCC1Q9HA90 CLTA-210ENST00000540080 989 ntTSL 2 BASIC27.38■■□□□ 1.97
EFCC1Q9HA90 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
EFCC1Q9HA90 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
EFCC1Q9HA90 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
EFCC1Q9HA90 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
EFCC1Q9HA90 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
EFCC1Q9HA90 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.37■■□□□ 1.97
EFCC1Q9HA90 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
EFCC1Q9HA90 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
EFCC1Q9HA90 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
EFCC1Q9HA90 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
EFCC1Q9HA90 HYI-206ENST00000372434 1025 ntTSL 5 BASIC27.36■■□□□ 1.97
EFCC1Q9HA90 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC27.36■■□□□ 1.97
EFCC1Q9HA90 AL136162.1-201ENST00000607711 1078 ntBASIC27.36■■□□□ 1.97
EFCC1Q9HA90 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC27.36■■□□□ 1.97
EFCC1Q9HA90 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.36■■□□□ 1.97
EFCC1Q9HA90 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
EFCC1Q9HA90 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.35■■□□□ 1.97
EFCC1Q9HA90 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC27.35■■□□□ 1.97
EFCC1Q9HA90 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.34■■□□□ 1.97
EFCC1Q9HA90 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
EFCC1Q9HA90 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC27.34■■□□□ 1.97
EFCC1Q9HA90 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC27.34■■□□□ 1.97
EFCC1Q9HA90 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
EFCC1Q9HA90 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
EFCC1Q9HA90 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
EFCC1Q9HA90 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
EFCC1Q9HA90 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
EFCC1Q9HA90 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
EFCC1Q9HA90 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
EFCC1Q9HA90 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
EFCC1Q9HA90 AC011551.1-201ENST00000614101 683 ntBASIC27.32■■□□□ 1.96
EFCC1Q9HA90 ANKRD20A6P-201ENST00000618763 204 ntBASIC27.32■■□□□ 1.96
EFCC1Q9HA90 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
EFCC1Q9HA90 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
EFCC1Q9HA90 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
EFCC1Q9HA90 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
EFCC1Q9HA90 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
EFCC1Q9HA90 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC27.31■■□□□ 1.96
EFCC1Q9HA90 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
EFCC1Q9HA90 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
EFCC1Q9HA90 EDA-201ENST00000338901 1233 ntBASIC27.3■■□□□ 1.96
EFCC1Q9HA90 TFPT-201ENST00000391757 774 ntTSL 5 BASIC27.3■■□□□ 1.96
EFCC1Q9HA90 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
EFCC1Q9HA90 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
EFCC1Q9HA90 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
EFCC1Q9HA90 AL355001.2-201ENST00000620617 1191 ntBASIC27.3■■□□□ 1.96
EFCC1Q9HA90 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
EFCC1Q9HA90 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
EFCC1Q9HA90 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC27.29■■□□□ 1.96
EFCC1Q9HA90 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
EFCC1Q9HA90 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
EFCC1Q9HA90 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
EFCC1Q9HA90 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
EFCC1Q9HA90 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
EFCC1Q9HA90 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
EFCC1Q9HA90 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC27.28■■□□□ 1.96
EFCC1Q9HA90 AC105265.2-201ENST00000467189 838 ntBASIC27.28■■□□□ 1.96
EFCC1Q9HA90 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC27.28■■□□□ 1.96
EFCC1Q9HA90 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
EFCC1Q9HA90 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
EFCC1Q9HA90 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
EFCC1Q9HA90 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC27.27■■□□□ 1.96
EFCC1Q9HA90 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
EFCC1Q9HA90 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
EFCC1Q9HA90 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
EFCC1Q9HA90 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
EFCC1Q9HA90 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
EFCC1Q9HA90 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC27.26■■□□□ 1.95
EFCC1Q9HA90 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC27.26■■□□□ 1.95
EFCC1Q9HA90 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
EFCC1Q9HA90 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.26■■□□□ 1.95
EFCC1Q9HA90 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
EFCC1Q9HA90 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms