Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LONRF2P2-201ENST00000439212 571 ntBASIC20.85■□□□□ 0.93
CSNK1A1P48729 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.85■□□□□ 0.93
CSNK1A1P48729 AP003733.4-201ENST00000623785 1697 ntBASIC20.85■□□□□ 0.93
CSNK1A1P48729 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1A1P48729 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CSNK1A1P48729 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1A1P48729 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.84■□□□□ 0.93
CSNK1A1P48729 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CSNK1A1P48729 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1A1P48729 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.84■□□□□ 0.93
CSNK1A1P48729 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.84■□□□□ 0.93
CSNK1A1P48729 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1A1P48729 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CSNK1A1P48729 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.83■□□□□ 0.93
CSNK1A1P48729 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1A1P48729 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1A1P48729 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1A1P48729 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.83■□□□□ 0.93
CSNK1A1P48729 AL592295.1-201ENST00000400984 884 ntBASIC20.83■□□□□ 0.93
CSNK1A1P48729 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CSNK1A1P48729 MIR6089-201ENST00000616698 64 ntBASIC20.83■□□□□ 0.93
CSNK1A1P48729 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CSNK1A1P48729 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1A1P48729 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1A1P48729 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CSNK1A1P48729 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1A1P48729 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.82■□□□□ 0.92
CSNK1A1P48729 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
CSNK1A1P48729 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1A1P48729 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1A1P48729 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK1A1P48729 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.82■□□□□ 0.92
CSNK1A1P48729 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.82■□□□□ 0.92
CSNK1A1P48729 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSNK1A1P48729 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.81■□□□□ 0.92
CSNK1A1P48729 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSNK1A1P48729 AL033527.3-201ENST00000566366 1196 ntBASIC20.81■□□□□ 0.92
CSNK1A1P48729 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.81■□□□□ 0.92
CSNK1A1P48729 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CSNK1A1P48729 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSNK1A1P48729 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK1A1P48729 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK1A1P48729 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK1A1P48729 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.8■□□□□ 0.92
CSNK1A1P48729 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CSNK1A1P48729 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.8■□□□□ 0.92
CSNK1A1P48729 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.8■□□□□ 0.92
CSNK1A1P48729 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK1A1P48729 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CSNK1A1P48729 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK1A1P48729 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CSNK1A1P48729 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.79■□□□□ 0.92
CSNK1A1P48729 AC074183.2-201ENST00000623112 922 ntBASIC20.79■□□□□ 0.92
CSNK1A1P48729 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.79■□□□□ 0.92
CSNK1A1P48729 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CSNK1A1P48729 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK1A1P48729 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK1A1P48729 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK1A1P48729 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.78■□□□□ 0.92
CSNK1A1P48729 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK1A1P48729 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.78■□□□□ 0.92
CSNK1A1P48729 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.78■□□□□ 0.92
CSNK1A1P48729 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.78■□□□□ 0.92
CSNK1A1P48729 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK1A1P48729 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1A1P48729 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1A1P48729 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1A1P48729 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.77■□□□□ 0.92
CSNK1A1P48729 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1A1P48729 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.77■□□□□ 0.92
CSNK1A1P48729 AC019171.1-201ENST00000601251 1056 ntBASIC20.77■□□□□ 0.92
CSNK1A1P48729 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1A1P48729 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1A1P48729 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.77■□□□□ 0.92
CSNK1A1P48729 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK1A1P48729 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.76■□□□□ 0.91
CSNK1A1P48729 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CSNK1A1P48729 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1A1P48729 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CSNK1A1P48729 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1A1P48729 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1A1P48729 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.76■□□□□ 0.91
CSNK1A1P48729 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1A1P48729 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1A1P48729 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.76■□□□□ 0.91
CSNK1A1P48729 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK1A1P48729 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1A1P48729 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1A1P48729 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1A1P48729 AC010980.1-201ENST00000587192 1142 ntBASIC20.75■□□□□ 0.91
CSNK1A1P48729 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1A1P48729 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1A1P48729 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CSNK1A1P48729 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1A1P48729 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1A1P48729 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK1A1P48729 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1A1P48729 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.74■□□□□ 0.91
CSNK1A1P48729 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.74■□□□□ 0.91
CSNK1A1P48729 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms