Protein–RNA interactions for Protein: P0DP02

IGHV3-30-3, Immunoglobulin heavy variable 3-30-3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-30-3P0DP02 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGHV3-30-3P0DP02 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
IGHV3-30-3P0DP02 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IGHV3-30-3P0DP02 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGHV3-30-3P0DP02 AC068473.5-201ENST00000616428 2072 ntBASIC16.48■□□□□ 0.23
IGHV3-30-3P0DP02 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGHV3-30-3P0DP02 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGHV3-30-3P0DP02 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.48■□□□□ 0.23
IGHV3-30-3P0DP02 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IGHV3-30-3P0DP02 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
IGHV3-30-3P0DP02 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGHV3-30-3P0DP02 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IGHV3-30-3P0DP02 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.47■□□□□ 0.23
IGHV3-30-3P0DP02 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IGHV3-30-3P0DP02 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.47■□□□□ 0.23
IGHV3-30-3P0DP02 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.47■□□□□ 0.23
IGHV3-30-3P0DP02 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 AC026202.3-201ENST00000600805 1127 ntBASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 LINC01124-201ENST00000409786 2117 ntBASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 AC009831.1-201ENST00000580420 1582 ntBASIC16.46■□□□□ 0.23
IGHV3-30-3P0DP02 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGHV3-30-3P0DP02 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGHV3-30-3P0DP02 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.45■□□□□ 0.22
IGHV3-30-3P0DP02 ABHD17AP5-201ENST00000580133 923 ntBASIC16.45■□□□□ 0.22
IGHV3-30-3P0DP02 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
IGHV3-30-3P0DP02 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGHV3-30-3P0DP02 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGHV3-30-3P0DP02 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGHV3-30-3P0DP02 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGHV3-30-3P0DP02 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.45■□□□□ 0.22
IGHV3-30-3P0DP02 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.44■□□□□ 0.22
IGHV3-30-3P0DP02 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV3-30-3P0DP02 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV3-30-3P0DP02 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV3-30-3P0DP02 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV3-30-3P0DP02 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
IGHV3-30-3P0DP02 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGHV3-30-3P0DP02 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.43■□□□□ 0.22
IGHV3-30-3P0DP02 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
IGHV3-30-3P0DP02 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGHV3-30-3P0DP02 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.42■□□□□ 0.22
IGHV3-30-3P0DP02 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGHV3-30-3P0DP02 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGHV3-30-3P0DP02 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IGHV3-30-3P0DP02 U85056.1-201ENST00000616429 682 ntBASIC16.42■□□□□ 0.22
IGHV3-30-3P0DP02 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGHV3-30-3P0DP02 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IGHV3-30-3P0DP02 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGHV3-30-3P0DP02 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
IGHV3-30-3P0DP02 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IGHV3-30-3P0DP02 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.42■□□□□ 0.22
IGHV3-30-3P0DP02 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGHV3-30-3P0DP02 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGHV3-30-3P0DP02 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IGHV3-30-3P0DP02 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IGHV3-30-3P0DP02 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.41■□□□□ 0.22
IGHV3-30-3P0DP02 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.41■□□□□ 0.22
IGHV3-30-3P0DP02 AL592293.1-201ENST00000502889 1188 ntBASIC16.41■□□□□ 0.22
IGHV3-30-3P0DP02 RAP2CP1-202ENST00000605179 643 ntBASIC16.41■□□□□ 0.22
IGHV3-30-3P0DP02 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
IGHV3-30-3P0DP02 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.41■□□□□ 0.22
IGHV3-30-3P0DP02 AC097639.1-201ENST00000565519 1891 ntBASIC16.41■□□□□ 0.22
IGHV3-30-3P0DP02 AC079834.2-201ENST00000609776 1949 ntBASIC16.41■□□□□ 0.22
IGHV3-30-3P0DP02 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
IGHV3-30-3P0DP02 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
IGHV3-30-3P0DP02 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGHV3-30-3P0DP02 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IGHV3-30-3P0DP02 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.39■□□□□ 0.22
IGHV3-30-3P0DP02 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms