Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD3DP04234 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CD3DP04234 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.86■□□□□ 0.77
CD3DP04234 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CD3DP04234 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD3DP04234 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD3DP04234 AC008813.1-201ENST00000536597 885 ntBASIC19.86■□□□□ 0.77
CD3DP04234 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.86■□□□□ 0.77
CD3DP04234 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD3DP04234 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CD3DP04234 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD3DP04234 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD3DP04234 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD3DP04234 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.85■□□□□ 0.77
CD3DP04234 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD3DP04234 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD3DP04234 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD3DP04234 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.84■□□□□ 0.77
CD3DP04234 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.84■□□□□ 0.77
CD3DP04234 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CD3DP04234 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CD3DP04234 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CD3DP04234 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CD3DP04234 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD3DP04234 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CD3DP04234 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD3DP04234 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CD3DP04234 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CD3DP04234 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.83■□□□□ 0.77
CD3DP04234 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CD3DP04234 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.83■□□□□ 0.76
CD3DP04234 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CD3DP04234 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.83■□□□□ 0.76
CD3DP04234 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.83■□□□□ 0.76
CD3DP04234 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CD3DP04234 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD3DP04234 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD3DP04234 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CD3DP04234 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CD3DP04234 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD3DP04234 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.82■□□□□ 0.76
CD3DP04234 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CD3DP04234 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CD3DP04234 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CD3DP04234 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CD3DP04234 AL117328.2-201ENST00000624617 1940 ntBASIC19.81■□□□□ 0.76
CD3DP04234 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.81■□□□□ 0.76
CD3DP04234 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CD3DP04234 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CD3DP04234 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.81■□□□□ 0.76
CD3DP04234 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD3DP04234 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CD3DP04234 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CD3DP04234 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.8■□□□□ 0.76
CD3DP04234 MIR6089-201ENST00000616698 64 ntBASIC19.8■□□□□ 0.76
CD3DP04234 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CD3DP04234 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.8■□□□□ 0.76
CD3DP04234 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CD3DP04234 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.8■□□□□ 0.76
CD3DP04234 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CD3DP04234 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD3DP04234 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD3DP04234 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.79■□□□□ 0.76
CD3DP04234 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CD3DP04234 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CD3DP04234 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CD3DP04234 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD3DP04234 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD3DP04234 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.78■□□□□ 0.76
CD3DP04234 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CD3DP04234 AL162393.1-201ENST00000437852 946 ntBASIC19.78■□□□□ 0.76
CD3DP04234 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CD3DP04234 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.78■□□□□ 0.76
CD3DP04234 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD3DP04234 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.78■□□□□ 0.76
CD3DP04234 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD3DP04234 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD3DP04234 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD3DP04234 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD3DP04234 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD3DP04234 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.77■□□□□ 0.76
CD3DP04234 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD3DP04234 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD3DP04234 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD3DP04234 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD3DP04234 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.77■□□□□ 0.76
CD3DP04234 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.77■□□□□ 0.76
CD3DP04234 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CD3DP04234 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CD3DP04234 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CD3DP04234 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD3DP04234 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CD3DP04234 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD3DP04234 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CD3DP04234 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CD3DP04234 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD3DP04234 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD3DP04234 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD3DP04234 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.76■□□□□ 0.75
CD3DP04234 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms