Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PPP1R3DO95685 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PPP1R3DO95685 AC141586.4-201ENST00000624558 1573 ntBASIC21.15■□□□□ 0.98
PPP1R3DO95685 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPP1R3DO95685 GPX1-201ENST00000419349 1106 ntBASIC21.15■□□□□ 0.98
PPP1R3DO95685 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.15■□□□□ 0.98
PPP1R3DO95685 RAP2CP1-202ENST00000605179 643 ntBASIC21.15■□□□□ 0.98
PPP1R3DO95685 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PPP1R3DO95685 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.15■□□□□ 0.98
PPP1R3DO95685 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PPP1R3DO95685 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PPP1R3DO95685 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.14■□□□□ 0.98
PPP1R3DO95685 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.14■□□□□ 0.98
PPP1R3DO95685 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PPP1R3DO95685 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PPP1R3DO95685 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.14■□□□□ 0.97
PPP1R3DO95685 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.14■□□□□ 0.97
PPP1R3DO95685 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PPP1R3DO95685 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PPP1R3DO95685 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PPP1R3DO95685 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PPP1R3DO95685 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPP1R3DO95685 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPP1R3DO95685 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPP1R3DO95685 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.13■□□□□ 0.97
PPP1R3DO95685 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PPP1R3DO95685 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPP1R3DO95685 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.13■□□□□ 0.97
PPP1R3DO95685 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.13■□□□□ 0.97
PPP1R3DO95685 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPP1R3DO95685 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PPP1R3DO95685 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PPP1R3DO95685 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPP1R3DO95685 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.12■□□□□ 0.97
PPP1R3DO95685 AC026202.3-201ENST00000600805 1127 ntBASIC21.12■□□□□ 0.97
PPP1R3DO95685 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPP1R3DO95685 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPP1R3DO95685 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PPP1R3DO95685 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP1R3DO95685 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.11■□□□□ 0.97
PPP1R3DO95685 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.1■□□□□ 0.97
PPP1R3DO95685 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PPP1R3DO95685 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PPP1R3DO95685 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PPP1R3DO95685 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PPP1R3DO95685 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PPP1R3DO95685 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.09■□□□□ 0.97
PPP1R3DO95685 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PPP1R3DO95685 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
PPP1R3DO95685 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PPP1R3DO95685 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.09■□□□□ 0.97
PPP1R3DO95685 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.08■□□□□ 0.97
PPP1R3DO95685 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PPP1R3DO95685 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PPP1R3DO95685 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PPP1R3DO95685 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PPP1R3DO95685 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PPP1R3DO95685 AC004812.2-201ENST00000611079 2094 ntBASIC21.08■□□□□ 0.96
PPP1R3DO95685 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.07■□□□□ 0.96
PPP1R3DO95685 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PPP1R3DO95685 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.07■□□□□ 0.96
PPP1R3DO95685 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.07■□□□□ 0.96
PPP1R3DO95685 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PPP1R3DO95685 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.07■□□□□ 0.96
PPP1R3DO95685 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PPP1R3DO95685 FOXO3B-201ENST00000395675 1928 ntBASIC21.07■□□□□ 0.96
PPP1R3DO95685 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PPP1R3DO95685 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PPP1R3DO95685 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PPP1R3DO95685 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PPP1R3DO95685 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PPP1R3DO95685 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPP1R3DO95685 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPP1R3DO95685 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PPP1R3DO95685 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PPP1R3DO95685 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.06■□□□□ 0.96
PPP1R3DO95685 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.06■□□□□ 0.96
PPP1R3DO95685 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PPP1R3DO95685 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3DO95685 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3DO95685 HLA-L-211ENST00000482052 1765 ntBASIC21.05■□□□□ 0.96
PPP1R3DO95685 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3DO95685 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3DO95685 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3DO95685 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3DO95685 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3DO95685 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.05■□□□□ 0.96
PPP1R3DO95685 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PPP1R3DO95685 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3DO95685 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3DO95685 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PPP1R3DO95685 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PPP1R3DO95685 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PPP1R3DO95685 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PPP1R3DO95685 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.04■□□□□ 0.96
PPP1R3DO95685 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PPP1R3DO95685 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PPP1R3DO95685 KRT18P10-201ENST00000388836 1287 ntBASIC21.04■□□□□ 0.96
PPP1R3DO95685 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.04■□□□□ 0.96
PPP1R3DO95685 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms