Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 AC060814.1-201ENST00000554326 538 ntBASIC20.43■□□□□ 0.86
KDM4BO94953 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.43■□□□□ 0.86
KDM4BO94953 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDM4BO94953 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDM4BO94953 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.43■□□□□ 0.86
KDM4BO94953 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
KDM4BO94953 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDM4BO94953 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
KDM4BO94953 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM4BO94953 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.42■□□□□ 0.86
KDM4BO94953 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.42■□□□□ 0.86
KDM4BO94953 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
KDM4BO94953 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM4BO94953 SLC6A10P-202ENST00000431994 2058 ntBASIC20.42■□□□□ 0.86
KDM4BO94953 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.42■□□□□ 0.86
KDM4BO94953 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM4BO94953 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
KDM4BO94953 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDM4BO94953 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDM4BO94953 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.41■□□□□ 0.86
KDM4BO94953 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDM4BO94953 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDM4BO94953 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDM4BO94953 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
KDM4BO94953 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KDM4BO94953 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDM4BO94953 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
KDM4BO94953 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDM4BO94953 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.41■□□□□ 0.86
KDM4BO94953 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.4■□□□□ 0.86
KDM4BO94953 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KDM4BO94953 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
KDM4BO94953 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KDM4BO94953 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KDM4BO94953 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KDM4BO94953 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KDM4BO94953 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KDM4BO94953 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KDM4BO94953 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.4■□□□□ 0.86
KDM4BO94953 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KDM4BO94953 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KDM4BO94953 AC025884.2-201ENST00000553429 711 ntBASIC20.4■□□□□ 0.86
KDM4BO94953 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.4■□□□□ 0.86
KDM4BO94953 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.4■□□□□ 0.86
KDM4BO94953 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KDM4BO94953 AC097639.1-201ENST00000565519 1891 ntBASIC20.39■□□□□ 0.86
KDM4BO94953 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KDM4BO94953 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KDM4BO94953 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KDM4BO94953 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KDM4BO94953 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.39■□□□□ 0.85
KDM4BO94953 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KDM4BO94953 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.39■□□□□ 0.85
KDM4BO94953 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KDM4BO94953 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KDM4BO94953 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KDM4BO94953 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
KDM4BO94953 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KDM4BO94953 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KDM4BO94953 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KDM4BO94953 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KDM4BO94953 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.38■□□□□ 0.85
KDM4BO94953 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KDM4BO94953 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.38■□□□□ 0.85
KDM4BO94953 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KDM4BO94953 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KDM4BO94953 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KDM4BO94953 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.38■□□□□ 0.85
KDM4BO94953 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KDM4BO94953 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KDM4BO94953 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KDM4BO94953 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM4BO94953 AC012676.1-201ENST00000574705 1949 ntBASIC20.37■□□□□ 0.85
KDM4BO94953 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
KDM4BO94953 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM4BO94953 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KDM4BO94953 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.37■□□□□ 0.85
KDM4BO94953 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
KDM4BO94953 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KDM4BO94953 LINC00543-201ENST00000567234 1845 ntBASIC20.37■□□□□ 0.85
KDM4BO94953 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
KDM4BO94953 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
KDM4BO94953 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KDM4BO94953 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KDM4BO94953 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
KDM4BO94953 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
KDM4BO94953 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.35■□□□□ 0.85
KDM4BO94953 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KDM4BO94953 AC068473.5-201ENST00000616428 2072 ntBASIC20.35■□□□□ 0.85
KDM4BO94953 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KDM4BO94953 MIR3960-201ENST00000583311 91 ntBASIC20.35■□□□□ 0.85
KDM4BO94953 AC092296.2-201ENST00000589470 999 ntBASIC20.35■□□□□ 0.85
KDM4BO94953 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KDM4BO94953 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KDM4BO94953 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.34■□□□□ 0.85
KDM4BO94953 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.34■□□□□ 0.85
KDM4BO94953 CLDN5-201ENST00000403084 2357 ntBASIC20.34■□□□□ 0.85
KDM4BO94953 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.34■□□□□ 0.85
KDM4BO94953 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
KDM4BO94953 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms