Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRDV1A0A1B0GX56 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRDV1A0A1B0GX56 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRDV1A0A1B0GX56 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRDV1A0A1B0GX56 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
TRDV1A0A1B0GX56 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.64■□□□□ 0.89
TRDV1A0A1B0GX56 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRDV1A0A1B0GX56 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRDV1A0A1B0GX56 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRDV1A0A1B0GX56 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRDV1A0A1B0GX56 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRDV1A0A1B0GX56 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRDV1A0A1B0GX56 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRDV1A0A1B0GX56 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRDV1A0A1B0GX56 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRDV1A0A1B0GX56 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRDV1A0A1B0GX56 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRDV1A0A1B0GX56 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.63■□□□□ 0.89
TRDV1A0A1B0GX56 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRDV1A0A1B0GX56 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TRDV1A0A1B0GX56 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRDV1A0A1B0GX56 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRDV1A0A1B0GX56 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRDV1A0A1B0GX56 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRDV1A0A1B0GX56 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRDV1A0A1B0GX56 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRDV1A0A1B0GX56 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.62■□□□□ 0.89
TRDV1A0A1B0GX56 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.62■□□□□ 0.89
TRDV1A0A1B0GX56 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRDV1A0A1B0GX56 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.62■□□□□ 0.89
TRDV1A0A1B0GX56 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRDV1A0A1B0GX56 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRDV1A0A1B0GX56 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRDV1A0A1B0GX56 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.61■□□□□ 0.89
TRDV1A0A1B0GX56 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRDV1A0A1B0GX56 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRDV1A0A1B0GX56 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRDV1A0A1B0GX56 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRDV1A0A1B0GX56 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRDV1A0A1B0GX56 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRDV1A0A1B0GX56 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRDV1A0A1B0GX56 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRDV1A0A1B0GX56 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TRDV1A0A1B0GX56 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.61■□□□□ 0.89
TRDV1A0A1B0GX56 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRDV1A0A1B0GX56 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRDV1A0A1B0GX56 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.6■□□□□ 0.89
TRDV1A0A1B0GX56 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.6■□□□□ 0.89
TRDV1A0A1B0GX56 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRDV1A0A1B0GX56 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRDV1A0A1B0GX56 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRDV1A0A1B0GX56 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRDV1A0A1B0GX56 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRDV1A0A1B0GX56 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.59■□□□□ 0.89
TRDV1A0A1B0GX56 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRDV1A0A1B0GX56 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.59■□□□□ 0.89
TRDV1A0A1B0GX56 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.59■□□□□ 0.89
TRDV1A0A1B0GX56 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRDV1A0A1B0GX56 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRDV1A0A1B0GX56 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRDV1A0A1B0GX56 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRDV1A0A1B0GX56 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TRDV1A0A1B0GX56 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.59■□□□□ 0.89
TRDV1A0A1B0GX56 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.58■□□□□ 0.89
TRDV1A0A1B0GX56 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TRDV1A0A1B0GX56 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRDV1A0A1B0GX56 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TRDV1A0A1B0GX56 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRDV1A0A1B0GX56 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.58■□□□□ 0.88
TRDV1A0A1B0GX56 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRDV1A0A1B0GX56 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.57■□□□□ 0.88
TRDV1A0A1B0GX56 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.57■□□□□ 0.88
TRDV1A0A1B0GX56 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRDV1A0A1B0GX56 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRDV1A0A1B0GX56 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRDV1A0A1B0GX56 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.57■□□□□ 0.88
TRDV1A0A1B0GX56 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
TRDV1A0A1B0GX56 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRDV1A0A1B0GX56 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRDV1A0A1B0GX56 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRDV1A0A1B0GX56 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRDV1A0A1B0GX56 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRDV1A0A1B0GX56 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.56■□□□□ 0.88
TRDV1A0A1B0GX56 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRDV1A0A1B0GX56 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.56■□□□□ 0.88
TRDV1A0A1B0GX56 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRDV1A0A1B0GX56 HLA-L-211ENST00000482052 1765 ntBASIC20.56■□□□□ 0.88
TRDV1A0A1B0GX56 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRDV1A0A1B0GX56 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 DUX4L13-201ENST00000554103 1267 ntBASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 DUX4L15-201ENST00000611059 1267 ntBASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 DUX4L23-201ENST00000615195 1269 ntBASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 DUX4L24-201ENST00000617576 1269 ntBASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 DUX4L22-201ENST00000618238 1269 ntBASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 DUX4L20-201ENST00000619712 1269 ntBASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 DUX4L21-201ENST00000622058 1269 ntBASIC20.55■□□□□ 0.88
TRDV1A0A1B0GX56 DUX4L10-201ENST00000622460 1267 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms