Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.17■□□□□ 0.66
SAA2-SAA4A0A096LPE2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SAA2-SAA4A0A096LPE2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SAA2-SAA4A0A096LPE2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SAA2-SAA4A0A096LPE2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.16■□□□□ 0.66
SAA2-SAA4A0A096LPE2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SAA2-SAA4A0A096LPE2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SAA2-SAA4A0A096LPE2 U85056.1-201ENST00000616429 682 ntBASIC19.16■□□□□ 0.66
SAA2-SAA4A0A096LPE2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.16■□□□□ 0.66
SAA2-SAA4A0A096LPE2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SAA2-SAA4A0A096LPE2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.16■□□□□ 0.66
SAA2-SAA4A0A096LPE2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.15■□□□□ 0.66
SAA2-SAA4A0A096LPE2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.15■□□□□ 0.66
SAA2-SAA4A0A096LPE2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SAA2-SAA4A0A096LPE2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.15■□□□□ 0.66
SAA2-SAA4A0A096LPE2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SAA2-SAA4A0A096LPE2 RPS2P7-201ENST00000447334 885 ntBASIC19.15■□□□□ 0.66
SAA2-SAA4A0A096LPE2 DUX4L9-201ENST00000449051 1259 ntBASIC19.15■□□□□ 0.66
SAA2-SAA4A0A096LPE2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.15■□□□□ 0.66
SAA2-SAA4A0A096LPE2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.15■□□□□ 0.66
SAA2-SAA4A0A096LPE2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.15■□□□□ 0.66
SAA2-SAA4A0A096LPE2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.15■□□□□ 0.66
SAA2-SAA4A0A096LPE2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.15■□□□□ 0.66
SAA2-SAA4A0A096LPE2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SAA2-SAA4A0A096LPE2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
SAA2-SAA4A0A096LPE2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SAA2-SAA4A0A096LPE2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.14■□□□□ 0.65
SAA2-SAA4A0A096LPE2 MIR6765-201ENST00000614092 87 ntBASIC19.14■□□□□ 0.65
SAA2-SAA4A0A096LPE2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.14■□□□□ 0.65
SAA2-SAA4A0A096LPE2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SAA2-SAA4A0A096LPE2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SAA2-SAA4A0A096LPE2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SAA2-SAA4A0A096LPE2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SAA2-SAA4A0A096LPE2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SAA2-SAA4A0A096LPE2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SAA2-SAA4A0A096LPE2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.13■□□□□ 0.65
SAA2-SAA4A0A096LPE2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SAA2-SAA4A0A096LPE2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SAA2-SAA4A0A096LPE2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SAA2-SAA4A0A096LPE2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SAA2-SAA4A0A096LPE2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SAA2-SAA4A0A096LPE2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
SAA2-SAA4A0A096LPE2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SAA2-SAA4A0A096LPE2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
SAA2-SAA4A0A096LPE2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SAA2-SAA4A0A096LPE2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SAA2-SAA4A0A096LPE2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.11■□□□□ 0.65
SAA2-SAA4A0A096LPE2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.11■□□□□ 0.65
SAA2-SAA4A0A096LPE2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SAA2-SAA4A0A096LPE2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SAA2-SAA4A0A096LPE2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SAA2-SAA4A0A096LPE2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SAA2-SAA4A0A096LPE2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SAA2-SAA4A0A096LPE2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SAA2-SAA4A0A096LPE2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SAA2-SAA4A0A096LPE2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SAA2-SAA4A0A096LPE2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.1■□□□□ 0.65
SAA2-SAA4A0A096LPE2 ABHD17AP5-201ENST00000580133 923 ntBASIC19.1■□□□□ 0.65
SAA2-SAA4A0A096LPE2 AC129492.7-201ENST00000622992 756 ntBASIC19.1■□□□□ 0.65
SAA2-SAA4A0A096LPE2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SAA2-SAA4A0A096LPE2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SAA2-SAA4A0A096LPE2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SAA2-SAA4A0A096LPE2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SAA2-SAA4A0A096LPE2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SAA2-SAA4A0A096LPE2 KRT18P60-201ENST00000312876 1297 ntBASIC19.09■□□□□ 0.65
SAA2-SAA4A0A096LPE2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.09■□□□□ 0.65
SAA2-SAA4A0A096LPE2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SAA2-SAA4A0A096LPE2 AC087393.1-201ENST00000582896 145 ntBASIC19.09■□□□□ 0.65
SAA2-SAA4A0A096LPE2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SAA2-SAA4A0A096LPE2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SAA2-SAA4A0A096LPE2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SAA2-SAA4A0A096LPE2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SAA2-SAA4A0A096LPE2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.09■□□□□ 0.65
SAA2-SAA4A0A096LPE2 LINC00543-201ENST00000567234 1845 ntBASIC19.09■□□□□ 0.65
SAA2-SAA4A0A096LPE2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SAA2-SAA4A0A096LPE2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SAA2-SAA4A0A096LPE2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SAA2-SAA4A0A096LPE2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SAA2-SAA4A0A096LPE2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SAA2-SAA4A0A096LPE2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SAA2-SAA4A0A096LPE2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SAA2-SAA4A0A096LPE2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SAA2-SAA4A0A096LPE2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SAA2-SAA4A0A096LPE2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SAA2-SAA4A0A096LPE2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SAA2-SAA4A0A096LPE2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SAA2-SAA4A0A096LPE2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SAA2-SAA4A0A096LPE2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SAA2-SAA4A0A096LPE2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SAA2-SAA4A0A096LPE2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.07■□□□□ 0.64
SAA2-SAA4A0A096LPE2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SAA2-SAA4A0A096LPE2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SAA2-SAA4A0A096LPE2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SAA2-SAA4A0A096LPE2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SAA2-SAA4A0A096LPE2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.07■□□□□ 0.64
SAA2-SAA4A0A096LPE2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SAA2-SAA4A0A096LPE2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SAA2-SAA4A0A096LPE2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
SAA2-SAA4A0A096LPE2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.07■□□□□ 0.64
SAA2-SAA4A0A096LPE2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms