Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
NOD1Q9Y239 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
NOD1Q9Y239 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
NOD1Q9Y239 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.48■■■□□ 2.79
NOD1Q9Y239 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.48■■■□□ 2.79
NOD1Q9Y239 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.48■■■□□ 2.79
NOD1Q9Y239 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
NOD1Q9Y239 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.45■■■□□ 2.79
NOD1Q9Y239 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.42■■■□□ 2.78
NOD1Q9Y239 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
NOD1Q9Y239 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
NOD1Q9Y239 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.38■■■□□ 2.77
NOD1Q9Y239 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
NOD1Q9Y239 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.29■■■□□ 2.76
NOD1Q9Y239 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.28■■■□□ 2.76
NOD1Q9Y239 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.27■■■□□ 2.76
NOD1Q9Y239 RARRES2P7-201ENST00000567349 469 ntBASIC32.25■■■□□ 2.75
NOD1Q9Y239 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
NOD1Q9Y239 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
NOD1Q9Y239 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
NOD1Q9Y239 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.23■■■□□ 2.75
NOD1Q9Y239 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.19■■■□□ 2.74
NOD1Q9Y239 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.17■■■□□ 2.74
NOD1Q9Y239 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.14■■■□□ 2.74
NOD1Q9Y239 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.13■■■□□ 2.73
NOD1Q9Y239 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.13■■■□□ 2.73
NOD1Q9Y239 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.12■■■□□ 2.73
NOD1Q9Y239 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.12■■■□□ 2.73
NOD1Q9Y239 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
NOD1Q9Y239 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
NOD1Q9Y239 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.08■■■□□ 2.73
NOD1Q9Y239 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
NOD1Q9Y239 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.06■■■□□ 2.72
NOD1Q9Y239 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.06■■■□□ 2.72
NOD1Q9Y239 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
NOD1Q9Y239 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
NOD1Q9Y239 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.99■■■□□ 2.71
NOD1Q9Y239 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
NOD1Q9Y239 AC097358.2-201ENST00000607541 1159 ntBASIC31.96■■■□□ 2.71
NOD1Q9Y239 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
NOD1Q9Y239 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.94■■■□□ 2.7
NOD1Q9Y239 SETD8P1-201ENST00000623146 1180 ntBASIC31.9■■■□□ 2.7
NOD1Q9Y239 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.89■■■□□ 2.7
NOD1Q9Y239 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NOD1Q9Y239 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.87■■■□□ 2.69
NOD1Q9Y239 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NOD1Q9Y239 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.82■■■□□ 2.68
NOD1Q9Y239 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NOD1Q9Y239 AC136428.2-201ENST00000563187 214 ntBASIC31.78■■■□□ 2.68
NOD1Q9Y239 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NOD1Q9Y239 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.76■■■□□ 2.67
NOD1Q9Y239 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
NOD1Q9Y239 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
NOD1Q9Y239 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.69■■■□□ 2.66
NOD1Q9Y239 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.68■■■□□ 2.66
NOD1Q9Y239 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
NOD1Q9Y239 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NOD1Q9Y239 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
NOD1Q9Y239 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
NOD1Q9Y239 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.63■■■□□ 2.65
NOD1Q9Y239 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.62■■■□□ 2.65
NOD1Q9Y239 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.62■■■□□ 2.65
NOD1Q9Y239 SUZ12P1-203ENST00000578195 985 ntBASIC31.62■■■□□ 2.65
NOD1Q9Y239 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.61■■■□□ 2.65
NOD1Q9Y239 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
NOD1Q9Y239 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
NOD1Q9Y239 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.59■■■□□ 2.65
NOD1Q9Y239 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NOD1Q9Y239 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
NOD1Q9Y239 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
NOD1Q9Y239 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.52■■■□□ 2.64
NOD1Q9Y239 AC145285.7-201ENST00000614819 1539 ntBASIC31.51■■■□□ 2.63
NOD1Q9Y239 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NOD1Q9Y239 RPS2P35-201ENST00000443417 897 ntBASIC31.5■■■□□ 2.63
NOD1Q9Y239 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NOD1Q9Y239 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.5■■■□□ 2.63
NOD1Q9Y239 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.48■■■□□ 2.63
NOD1Q9Y239 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
NOD1Q9Y239 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
NOD1Q9Y239 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NOD1Q9Y239 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NOD1Q9Y239 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NOD1Q9Y239 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
NOD1Q9Y239 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
NOD1Q9Y239 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
NOD1Q9Y239 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NOD1Q9Y239 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NOD1Q9Y239 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.31■■■□□ 2.6
NOD1Q9Y239 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
NOD1Q9Y239 CAHM-201ENST00000604200 896 ntBASIC31.28■■■□□ 2.6
NOD1Q9Y239 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
NOD1Q9Y239 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NOD1Q9Y239 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.23■■■□□ 2.59
NOD1Q9Y239 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NOD1Q9Y239 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
NOD1Q9Y239 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
NOD1Q9Y239 AL391121.1-201ENST00000607967 1349 ntBASIC31.19■■■□□ 2.58
NOD1Q9Y239 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.18■■■□□ 2.58
NOD1Q9Y239 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.18■■■□□ 2.58
NOD1Q9Y239 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms