Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
NPIPA1Q9UND3 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.61■■□□□ 1.85
NPIPA1Q9UND3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NPIPA1Q9UND3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NPIPA1Q9UND3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
NPIPA1Q9UND3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
NPIPA1Q9UND3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
NPIPA1Q9UND3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NPIPA1Q9UND3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NPIPA1Q9UND3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.53■■□□□ 1.84
NPIPA1Q9UND3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.53■■□□□ 1.84
NPIPA1Q9UND3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NPIPA1Q9UND3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NPIPA1Q9UND3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NPIPA1Q9UND3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
NPIPA1Q9UND3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NPIPA1Q9UND3 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.43■■□□□ 1.82
NPIPA1Q9UND3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
NPIPA1Q9UND3 AL031258.1-201ENST00000623562 325 ntBASIC26.42■■□□□ 1.82
NPIPA1Q9UND3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
NPIPA1Q9UND3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NPIPA1Q9UND3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NPIPA1Q9UND3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.36■■□□□ 1.81
NPIPA1Q9UND3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.35■■□□□ 1.81
NPIPA1Q9UND3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
NPIPA1Q9UND3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
NPIPA1Q9UND3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.26■■□□□ 1.79
NPIPA1Q9UND3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.26■■□□□ 1.79
NPIPA1Q9UND3 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NPIPA1Q9UND3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NPIPA1Q9UND3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NPIPA1Q9UND3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NPIPA1Q9UND3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
NPIPA1Q9UND3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NPIPA1Q9UND3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
NPIPA1Q9UND3 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
NPIPA1Q9UND3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.16■■□□□ 1.78
NPIPA1Q9UND3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
NPIPA1Q9UND3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.15■■□□□ 1.78
NPIPA1Q9UND3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.14■■□□□ 1.78
NPIPA1Q9UND3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
NPIPA1Q9UND3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
NPIPA1Q9UND3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.08■■□□□ 1.77
NPIPA1Q9UND3 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
NPIPA1Q9UND3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NPIPA1Q9UND3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.04■■□□□ 1.76
NPIPA1Q9UND3 RARRES2P7-201ENST00000567349 469 ntBASIC26.03■■□□□ 1.76
NPIPA1Q9UND3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NPIPA1Q9UND3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.01■■□□□ 1.75
NPIPA1Q9UND3 AC145285.7-201ENST00000614819 1539 ntBASIC25.99■■□□□ 1.75
NPIPA1Q9UND3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.99■■□□□ 1.75
NPIPA1Q9UND3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
NPIPA1Q9UND3 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NPIPA1Q9UND3 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
NPIPA1Q9UND3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.97■■□□□ 1.75
NPIPA1Q9UND3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
NPIPA1Q9UND3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
NPIPA1Q9UND3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.94■■□□□ 1.74
NPIPA1Q9UND3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
NPIPA1Q9UND3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.93■■□□□ 1.74
NPIPA1Q9UND3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NPIPA1Q9UND3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.92■■□□□ 1.74
NPIPA1Q9UND3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NPIPA1Q9UND3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.91■■□□□ 1.74
NPIPA1Q9UND3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
NPIPA1Q9UND3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
NPIPA1Q9UND3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.85■■□□□ 1.73
NPIPA1Q9UND3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.85■■□□□ 1.73
NPIPA1Q9UND3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25.85■■□□□ 1.73
NPIPA1Q9UND3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.83■■□□□ 1.73
NPIPA1Q9UND3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.83■■□□□ 1.73
NPIPA1Q9UND3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
NPIPA1Q9UND3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.82■■□□□ 1.72
NPIPA1Q9UND3 AC097358.2-201ENST00000607541 1159 ntBASIC25.8■■□□□ 1.72
NPIPA1Q9UND3 SETD8P1-201ENST00000623146 1180 ntBASIC25.79■■□□□ 1.72
NPIPA1Q9UND3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
NPIPA1Q9UND3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.78■■□□□ 1.72
NPIPA1Q9UND3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NPIPA1Q9UND3 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
NPIPA1Q9UND3 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.73■■□□□ 1.71
NPIPA1Q9UND3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.72■■□□□ 1.71
NPIPA1Q9UND3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.72■■□□□ 1.71
NPIPA1Q9UND3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NPIPA1Q9UND3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.69■■□□□ 1.7
NPIPA1Q9UND3 AC136428.2-201ENST00000563187 214 ntBASIC25.67■■□□□ 1.7
NPIPA1Q9UND3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NPIPA1Q9UND3 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NPIPA1Q9UND3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NPIPA1Q9UND3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.6■■□□□ 1.69
NPIPA1Q9UND3 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NPIPA1Q9UND3 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NPIPA1Q9UND3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
NPIPA1Q9UND3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.59■■□□□ 1.69
NPIPA1Q9UND3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
NPIPA1Q9UND3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NPIPA1Q9UND3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
NPIPA1Q9UND3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.57■■□□□ 1.68
NPIPA1Q9UND3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.56■■□□□ 1.68
NPIPA1Q9UND3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.56■■□□□ 1.68
NPIPA1Q9UND3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms