Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHD8Q9HCK8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.6■■■□□ 2.17
CHD8Q9HCK8 AC097358.2-201ENST00000607541 1159 ntBASIC28.58■■■□□ 2.17
CHD8Q9HCK8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CHD8Q9HCK8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CHD8Q9HCK8 AL031258.1-201ENST00000623562 325 ntBASIC28.48■■■□□ 2.15
CHD8Q9HCK8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
CHD8Q9HCK8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHD8Q9HCK8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.43■■■□□ 2.14
CHD8Q9HCK8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.43■■■□□ 2.14
CHD8Q9HCK8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CHD8Q9HCK8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
CHD8Q9HCK8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.4■■■□□ 2.14
CHD8Q9HCK8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
CHD8Q9HCK8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.39■■■□□ 2.13
CHD8Q9HCK8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CHD8Q9HCK8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CHD8Q9HCK8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CHD8Q9HCK8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CHD8Q9HCK8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.27■■■□□ 2.12
CHD8Q9HCK8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CHD8Q9HCK8 AL162393.1-201ENST00000437852 946 ntBASIC28.26■■■□□ 2.11
CHD8Q9HCK8 SETD8P1-201ENST00000623146 1180 ntBASIC28.25■■■□□ 2.11
CHD8Q9HCK8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHD8Q9HCK8 HLA-V-202ENST00000446817 847 ntBASIC28.25■■■□□ 2.11
CHD8Q9HCK8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CHD8Q9HCK8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CHD8Q9HCK8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHD8Q9HCK8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.2■■■□□ 2.1
CHD8Q9HCK8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
CHD8Q9HCK8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.19■■■□□ 2.1
CHD8Q9HCK8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHD8Q9HCK8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.17■■■□□ 2.1
CHD8Q9HCK8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHD8Q9HCK8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.12■■■□□ 2.09
CHD8Q9HCK8 MIR7108-201ENST00000614319 87 ntBASIC28.12■■■□□ 2.09
CHD8Q9HCK8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHD8Q9HCK8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.1■■■□□ 2.09
CHD8Q9HCK8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.06■■■□□ 2.08
CHD8Q9HCK8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.04■■■□□ 2.08
CHD8Q9HCK8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
CHD8Q9HCK8 AP006261.1-201ENST00000584783 668 ntBASIC28.02■■■□□ 2.08
CHD8Q9HCK8 ABHD17AP4-201ENST00000411545 909 ntBASIC28■■■□□ 2.07
CHD8Q9HCK8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.99■■■□□ 2.07
CHD8Q9HCK8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CHD8Q9HCK8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
CHD8Q9HCK8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CHD8Q9HCK8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.97■■■□□ 2.07
CHD8Q9HCK8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CHD8Q9HCK8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CHD8Q9HCK8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
CHD8Q9HCK8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.9■■■□□ 2.06
CHD8Q9HCK8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.9■■■□□ 2.06
CHD8Q9HCK8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.88■■■□□ 2.05
CHD8Q9HCK8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CHD8Q9HCK8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.84■■■□□ 2.05
CHD8Q9HCK8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.82■■■□□ 2.04
CHD8Q9HCK8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CHD8Q9HCK8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
CHD8Q9HCK8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.76■■■□□ 2.03
CHD8Q9HCK8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CHD8Q9HCK8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CHD8Q9HCK8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CHD8Q9HCK8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
CHD8Q9HCK8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.72■■■□□ 2.03
CHD8Q9HCK8 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.71■■■□□ 2.03
CHD8Q9HCK8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CHD8Q9HCK8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.71■■■□□ 2.03
CHD8Q9HCK8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.71■■■□□ 2.03
CHD8Q9HCK8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
CHD8Q9HCK8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.69■■■□□ 2.02
CHD8Q9HCK8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CHD8Q9HCK8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CHD8Q9HCK8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CHD8Q9HCK8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CHD8Q9HCK8 CAHM-201ENST00000604200 896 ntBASIC27.65■■■□□ 2.02
CHD8Q9HCK8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.64■■■□□ 2.01
CHD8Q9HCK8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.62■■■□□ 2.01
CHD8Q9HCK8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHD8Q9HCK8 AL391121.1-201ENST00000607967 1349 ntBASIC27.61■■■□□ 2.01
CHD8Q9HCK8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD8Q9HCK8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.57■■■□□ 2
CHD8Q9HCK8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.56■■■□□ 2
CHD8Q9HCK8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.55■■■□□ 2
CHD8Q9HCK8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHD8Q9HCK8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHD8Q9HCK8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.52■■■□□ 2
CHD8Q9HCK8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
CHD8Q9HCK8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHD8Q9HCK8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.51■■□□□ 1.99
CHD8Q9HCK8 MIR3665-201ENST00000578708 105 ntBASIC27.51■■□□□ 1.99
CHD8Q9HCK8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHD8Q9HCK8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.46■■□□□ 1.99
CHD8Q9HCK8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.46■■□□□ 1.99
CHD8Q9HCK8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.46■■□□□ 1.99
CHD8Q9HCK8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.45■■□□□ 1.98
CHD8Q9HCK8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.44■■□□□ 1.98
CHD8Q9HCK8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CHD8Q9HCK8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CHD8Q9HCK8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms