Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC38.92■■■■□ 3.82
RAPGEF4Q8WZA2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC38.92■■■■□ 3.82
RAPGEF4Q8WZA2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC38.87■■■■□ 3.81
RAPGEF4Q8WZA2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC38.83■■■■□ 3.81
RAPGEF4Q8WZA2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC38.83■■■■□ 3.81
RAPGEF4Q8WZA2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
RAPGEF4Q8WZA2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC38.78■■■■□ 3.8
RAPGEF4Q8WZA2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
RAPGEF4Q8WZA2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
RAPGEF4Q8WZA2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
RAPGEF4Q8WZA2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC38.71■■■■□ 3.79
RAPGEF4Q8WZA2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC38.68■■■■□ 3.78
RAPGEF4Q8WZA2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
RAPGEF4Q8WZA2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
RAPGEF4Q8WZA2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC38.6■■■■□ 3.77
RAPGEF4Q8WZA2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC38.56■■■■□ 3.76
RAPGEF4Q8WZA2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC38.56■■■■□ 3.76
RAPGEF4Q8WZA2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC38.54■■■■□ 3.76
RAPGEF4Q8WZA2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC38.49■■■■□ 3.75
RAPGEF4Q8WZA2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC38.48■■■■□ 3.75
RAPGEF4Q8WZA2 RARRES2P7-201ENST00000567349 469 ntBASIC38.48■■■■□ 3.75
RAPGEF4Q8WZA2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC38.46■■■■□ 3.75
RAPGEF4Q8WZA2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC38.46■■■■□ 3.75
RAPGEF4Q8WZA2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC38.46■■■■□ 3.75
RAPGEF4Q8WZA2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC38.44■■■■□ 3.74
RAPGEF4Q8WZA2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC38.44■■■■□ 3.74
RAPGEF4Q8WZA2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC38.42■■■■□ 3.74
RAPGEF4Q8WZA2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC38.41■■■■□ 3.74
RAPGEF4Q8WZA2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
RAPGEF4Q8WZA2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC38.39■■■■□ 3.74
RAPGEF4Q8WZA2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC38.37■■■■□ 3.73
RAPGEF4Q8WZA2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC38.37■■■■□ 3.73
RAPGEF4Q8WZA2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
RAPGEF4Q8WZA2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC38.35■■■■□ 3.73
RAPGEF4Q8WZA2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC38.31■■■■□ 3.72
RAPGEF4Q8WZA2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC38.27■■■■□ 3.72
RAPGEF4Q8WZA2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC38.26■■■■□ 3.72
RAPGEF4Q8WZA2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC38.23■■■■□ 3.71
RAPGEF4Q8WZA2 AC097358.2-201ENST00000607541 1159 ntBASIC38.18■■■■□ 3.7
RAPGEF4Q8WZA2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
RAPGEF4Q8WZA2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC38.16■■■■□ 3.7
RAPGEF4Q8WZA2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC38.14■■■■□ 3.7
RAPGEF4Q8WZA2 SETD8P1-201ENST00000623146 1180 ntBASIC38.13■■■■□ 3.69
RAPGEF4Q8WZA2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC38.12■■■■□ 3.69
RAPGEF4Q8WZA2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC38.12■■■■□ 3.69
RAPGEF4Q8WZA2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
RAPGEF4Q8WZA2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
RAPGEF4Q8WZA2 AC136428.2-201ENST00000563187 214 ntBASIC38.07■■■■□ 3.68
RAPGEF4Q8WZA2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
RAPGEF4Q8WZA2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC37.99■■■■□ 3.67
RAPGEF4Q8WZA2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC37.98■■■■□ 3.67
RAPGEF4Q8WZA2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC37.96■■■■□ 3.67
RAPGEF4Q8WZA2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
RAPGEF4Q8WZA2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
RAPGEF4Q8WZA2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
RAPGEF4Q8WZA2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC37.92■■■■□ 3.66
RAPGEF4Q8WZA2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC37.91■■■■□ 3.66
RAPGEF4Q8WZA2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC37.89■■■■□ 3.66
RAPGEF4Q8WZA2 SUZ12P1-203ENST00000578195 985 ntBASIC37.87■■■■□ 3.65
RAPGEF4Q8WZA2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC37.85■■■■□ 3.65
RAPGEF4Q8WZA2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
RAPGEF4Q8WZA2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC37.82■■■■□ 3.64
RAPGEF4Q8WZA2 MVK-208ENST00000539696 608 ntTSL 5 BASIC37.82■■■■□ 3.64
RAPGEF4Q8WZA2 AC145285.7-201ENST00000614819 1539 ntBASIC37.81■■■■□ 3.64
RAPGEF4Q8WZA2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC37.79■■■■□ 3.64
RAPGEF4Q8WZA2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC37.78■■■■□ 3.64
RAPGEF4Q8WZA2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
RAPGEF4Q8WZA2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC37.77■■■■□ 3.64
RAPGEF4Q8WZA2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
RAPGEF4Q8WZA2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC37.74■■■■□ 3.63
RAPGEF4Q8WZA2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC37.73■■■■□ 3.63
RAPGEF4Q8WZA2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC37.72■■■■□ 3.63
RAPGEF4Q8WZA2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC37.67■■■■□ 3.62
RAPGEF4Q8WZA2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC37.65■■■■□ 3.62
RAPGEF4Q8WZA2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
RAPGEF4Q8WZA2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC37.62■■■■□ 3.61
RAPGEF4Q8WZA2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
RAPGEF4Q8WZA2 RPS2P35-201ENST00000443417 897 ntBASIC37.6■■■■□ 3.61
RAPGEF4Q8WZA2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC37.58■■■■□ 3.61
RAPGEF4Q8WZA2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
RAPGEF4Q8WZA2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC37.56■■■■□ 3.6
RAPGEF4Q8WZA2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
RAPGEF4Q8WZA2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
RAPGEF4Q8WZA2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
RAPGEF4Q8WZA2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
RAPGEF4Q8WZA2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
RAPGEF4Q8WZA2 CAHM-201ENST00000604200 896 ntBASIC37.49■■■■□ 3.59
RAPGEF4Q8WZA2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
RAPGEF4Q8WZA2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC37.44■■■■□ 3.58
RAPGEF4Q8WZA2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC37.43■■■■□ 3.58
RAPGEF4Q8WZA2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC37.43■■■■□ 3.58
RAPGEF4Q8WZA2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
RAPGEF4Q8WZA2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC37.39■■■■□ 3.58
RAPGEF4Q8WZA2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
RAPGEF4Q8WZA2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
RAPGEF4Q8WZA2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
RAPGEF4Q8WZA2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
RAPGEF4Q8WZA2 AL133380.1-201ENST00000506013 324 ntBASIC37.33■■■■□ 3.57
RAPGEF4Q8WZA2 AL391121.1-201ENST00000607967 1349 ntBASIC37.33■■■■□ 3.57
RAPGEF4Q8WZA2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms