Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
LINC01006Q8NI28 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
LINC01006Q8NI28 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC23■■□□□ 1.27
LINC01006Q8NI28 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
LINC01006Q8NI28 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LINC01006Q8NI28 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC22.98■■□□□ 1.27
LINC01006Q8NI28 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC22.98■■□□□ 1.27
LINC01006Q8NI28 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LINC01006Q8NI28 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LINC01006Q8NI28 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
LINC01006Q8NI28 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LINC01006Q8NI28 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.91■■□□□ 1.26
LINC01006Q8NI28 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.91■■□□□ 1.26
LINC01006Q8NI28 ILK-212ENST00000532063 1617 ntTSL 2 BASIC22.87■■□□□ 1.25
LINC01006Q8NI28 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LINC01006Q8NI28 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LINC01006Q8NI28 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC22.82■■□□□ 1.24
LINC01006Q8NI28 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
LINC01006Q8NI28 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC22.79■■□□□ 1.24
LINC01006Q8NI28 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LINC01006Q8NI28 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
LINC01006Q8NI28 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
LINC01006Q8NI28 RARRES2P7-201ENST00000567349 469 ntBASIC22.78■■□□□ 1.24
LINC01006Q8NI28 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
LINC01006Q8NI28 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
LINC01006Q8NI28 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.76■■□□□ 1.23
LINC01006Q8NI28 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.75■■□□□ 1.23
LINC01006Q8NI28 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.75■■□□□ 1.23
LINC01006Q8NI28 EBPL-203ENST00000378270 579 ntTSL 2 BASIC22.74■■□□□ 1.23
LINC01006Q8NI28 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
LINC01006Q8NI28 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LINC01006Q8NI28 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC22.73■■□□□ 1.23
LINC01006Q8NI28 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.71■■□□□ 1.23
LINC01006Q8NI28 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LINC01006Q8NI28 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
LINC01006Q8NI28 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC22.68■■□□□ 1.22
LINC01006Q8NI28 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.65■■□□□ 1.22
LINC01006Q8NI28 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.63■■□□□ 1.21
LINC01006Q8NI28 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LINC01006Q8NI28 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC22.61■■□□□ 1.21
LINC01006Q8NI28 AC097358.2-201ENST00000607541 1159 ntBASIC22.6■■□□□ 1.21
LINC01006Q8NI28 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.58■■□□□ 1.21
LINC01006Q8NI28 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.57■■□□□ 1.2
LINC01006Q8NI28 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LINC01006Q8NI28 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LINC01006Q8NI28 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.56■■□□□ 1.2
LINC01006Q8NI28 SETD8P1-201ENST00000623146 1180 ntBASIC22.56■■□□□ 1.2
LINC01006Q8NI28 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LINC01006Q8NI28 AC136428.2-201ENST00000563187 214 ntBASIC22.51■■□□□ 1.19
LINC01006Q8NI28 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.5■■□□□ 1.19
LINC01006Q8NI28 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC22.49■■□□□ 1.19
LINC01006Q8NI28 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LINC01006Q8NI28 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LINC01006Q8NI28 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.48■■□□□ 1.19
LINC01006Q8NI28 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
LINC01006Q8NI28 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LINC01006Q8NI28 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LINC01006Q8NI28 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LINC01006Q8NI28 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.42■■□□□ 1.18
LINC01006Q8NI28 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.4■■□□□ 1.18
LINC01006Q8NI28 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
LINC01006Q8NI28 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LINC01006Q8NI28 SUZ12P1-203ENST00000578195 985 ntBASIC22.39■■□□□ 1.17
LINC01006Q8NI28 AC145285.7-201ENST00000614819 1539 ntBASIC22.38■■□□□ 1.17
LINC01006Q8NI28 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.38■■□□□ 1.17
LINC01006Q8NI28 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.38■■□□□ 1.17
LINC01006Q8NI28 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC22.37■■□□□ 1.17
LINC01006Q8NI28 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LINC01006Q8NI28 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.36■■□□□ 1.17
LINC01006Q8NI28 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LINC01006Q8NI28 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LINC01006Q8NI28 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LINC01006Q8NI28 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LINC01006Q8NI28 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.29■■□□□ 1.16
LINC01006Q8NI28 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LINC01006Q8NI28 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
LINC01006Q8NI28 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINC01006Q8NI28 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LINC01006Q8NI28 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
LINC01006Q8NI28 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LINC01006Q8NI28 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINC01006Q8NI28 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LINC01006Q8NI28 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LINC01006Q8NI28 RPS2P35-201ENST00000443417 897 ntBASIC22.24■■□□□ 1.15
LINC01006Q8NI28 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
LINC01006Q8NI28 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LINC01006Q8NI28 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LINC01006Q8NI28 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC22.21■■□□□ 1.15
LINC01006Q8NI28 CAHM-201ENST00000604200 896 ntBASIC22.19■■□□□ 1.14
LINC01006Q8NI28 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.17■■□□□ 1.14
LINC01006Q8NI28 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LINC01006Q8NI28 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC22.16■■□□□ 1.14
LINC01006Q8NI28 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LINC01006Q8NI28 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LINC01006Q8NI28 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
LINC01006Q8NI28 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LINC01006Q8NI28 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LINC01006Q8NI28 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LINC01006Q8NI28 AL133380.1-201ENST00000506013 324 ntBASIC22.1■■□□□ 1.13
LINC01006Q8NI28 AL391121.1-201ENST00000607967 1349 ntBASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms