Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL031258.1-201ENST00000623562 325 ntBASIC31.05■■■□□ 2.56
RNF135Q8IUD6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.04■■■□□ 2.56
RNF135Q8IUD6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RNF135Q8IUD6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.04■■■□□ 2.56
RNF135Q8IUD6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
RNF135Q8IUD6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
RNF135Q8IUD6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.01■■■□□ 2.55
RNF135Q8IUD6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31■■■□□ 2.55
RNF135Q8IUD6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31■■■□□ 2.55
RNF135Q8IUD6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
RNF135Q8IUD6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.96■■■□□ 2.55
RNF135Q8IUD6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.93■■■□□ 2.54
RNF135Q8IUD6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RNF135Q8IUD6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
RNF135Q8IUD6 RARRES2P7-201ENST00000567349 469 ntBASIC30.88■■■□□ 2.53
RNF135Q8IUD6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
RNF135Q8IUD6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RNF135Q8IUD6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.8■■■□□ 2.52
RNF135Q8IUD6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RNF135Q8IUD6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
RNF135Q8IUD6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RNF135Q8IUD6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
RNF135Q8IUD6 AC097358.2-201ENST00000607541 1159 ntBASIC30.71■■■□□ 2.51
RNF135Q8IUD6 RPS2P35-201ENST00000443417 897 ntBASIC30.69■■■□□ 2.5
RNF135Q8IUD6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.69■■■□□ 2.5
RNF135Q8IUD6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RNF135Q8IUD6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RNF135Q8IUD6 AC136428.2-201ENST00000563187 214 ntBASIC30.56■■■□□ 2.48
RNF135Q8IUD6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.55■■■□□ 2.48
RNF135Q8IUD6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
RNF135Q8IUD6 SUZ12P1-203ENST00000578195 985 ntBASIC30.53■■■□□ 2.48
RNF135Q8IUD6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
RNF135Q8IUD6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.52■■■□□ 2.48
RNF135Q8IUD6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
RNF135Q8IUD6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
RNF135Q8IUD6 SETD8P1-201ENST00000623146 1180 ntBASIC30.49■■■□□ 2.47
RNF135Q8IUD6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.46■■■□□ 2.47
RNF135Q8IUD6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
RNF135Q8IUD6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
RNF135Q8IUD6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RNF135Q8IUD6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RNF135Q8IUD6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
RNF135Q8IUD6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
RNF135Q8IUD6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RNF135Q8IUD6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.37■■■□□ 2.45
RNF135Q8IUD6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RNF135Q8IUD6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.36■■■□□ 2.45
RNF135Q8IUD6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RNF135Q8IUD6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RNF135Q8IUD6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.3■■■□□ 2.44
RNF135Q8IUD6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RNF135Q8IUD6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RNF135Q8IUD6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.28■■■□□ 2.44
RNF135Q8IUD6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.26■■■□□ 2.43
RNF135Q8IUD6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
RNF135Q8IUD6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.23■■■□□ 2.43
RNF135Q8IUD6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.22■■■□□ 2.43
RNF135Q8IUD6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RNF135Q8IUD6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.19■■■□□ 2.42
RNF135Q8IUD6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RNF135Q8IUD6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.18■■■□□ 2.42
RNF135Q8IUD6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
RNF135Q8IUD6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
RNF135Q8IUD6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.09■■■□□ 2.41
RNF135Q8IUD6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.06■■■□□ 2.4
RNF135Q8IUD6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.06■■■□□ 2.4
RNF135Q8IUD6 AL162393.1-201ENST00000437852 946 ntBASIC30.03■■■□□ 2.4
RNF135Q8IUD6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.03■■■□□ 2.4
RNF135Q8IUD6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RNF135Q8IUD6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RNF135Q8IUD6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.02■■■□□ 2.4
RNF135Q8IUD6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RNF135Q8IUD6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RNF135Q8IUD6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
RNF135Q8IUD6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.99■■■□□ 2.39
RNF135Q8IUD6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.99■■■□□ 2.39
RNF135Q8IUD6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RNF135Q8IUD6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.98■■■□□ 2.39
RNF135Q8IUD6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RNF135Q8IUD6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
RNF135Q8IUD6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.94■■■□□ 2.38
RNF135Q8IUD6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RNF135Q8IUD6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RNF135Q8IUD6 AP006261.1-201ENST00000584783 668 ntBASIC29.91■■■□□ 2.38
RNF135Q8IUD6 CAHM-201ENST00000604200 896 ntBASIC29.91■■■□□ 2.38
RNF135Q8IUD6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
RNF135Q8IUD6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RNF135Q8IUD6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RNF135Q8IUD6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
RNF135Q8IUD6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
RNF135Q8IUD6 MIR7108-201ENST00000614319 87 ntBASIC29.83■■■□□ 2.37
RNF135Q8IUD6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RNF135Q8IUD6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RNF135Q8IUD6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RNF135Q8IUD6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RNF135Q8IUD6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.78■■■□□ 2.36
RNF135Q8IUD6 ABHD17AP4-201ENST00000411545 909 ntBASIC29.77■■■□□ 2.36
RNF135Q8IUD6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
RNF135Q8IUD6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.76■■■□□ 2.35
RNF135Q8IUD6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms