Protein–RNA interactions for Protein: Q7Z5N4

SDK1, Protein sidekick-1, humanhuman

Predictions only

Length 2,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1Q7Z5N4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SDK1Q7Z5N4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.44■■■□□ 2.3
SDK1Q7Z5N4 RARRES2P7-201ENST00000567349 469 ntBASIC29.44■■■□□ 2.3
SDK1Q7Z5N4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.44■■■□□ 2.3
SDK1Q7Z5N4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.44■■■□□ 2.3
SDK1Q7Z5N4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.44■■■□□ 2.3
SDK1Q7Z5N4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
SDK1Q7Z5N4 AL031258.1-201ENST00000623562 325 ntBASIC29.43■■■□□ 2.3
SDK1Q7Z5N4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.43■■■□□ 2.3
SDK1Q7Z5N4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SDK1Q7Z5N4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
SDK1Q7Z5N4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.36■■■□□ 2.29
SDK1Q7Z5N4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.36■■■□□ 2.29
SDK1Q7Z5N4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SDK1Q7Z5N4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SDK1Q7Z5N4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SDK1Q7Z5N4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
SDK1Q7Z5N4 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.26■■■□□ 2.27
SDK1Q7Z5N4 RPS2P35-201ENST00000443417 897 ntBASIC29.25■■■□□ 2.27
SDK1Q7Z5N4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.24■■■□□ 2.27
SDK1Q7Z5N4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.21■■■□□ 2.27
SDK1Q7Z5N4 AC097358.2-201ENST00000607541 1159 ntBASIC29.17■■■□□ 2.26
SDK1Q7Z5N4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SDK1Q7Z5N4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
SDK1Q7Z5N4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
SDK1Q7Z5N4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SDK1Q7Z5N4 AC136428.2-201ENST00000563187 214 ntBASIC29.12■■■□□ 2.25
SDK1Q7Z5N4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SDK1Q7Z5N4 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.08■■■□□ 2.25
SDK1Q7Z5N4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.07■■■□□ 2.24
SDK1Q7Z5N4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.06■■■□□ 2.24
SDK1Q7Z5N4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.04■■■□□ 2.24
SDK1Q7Z5N4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
SDK1Q7Z5N4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.03■■■□□ 2.24
SDK1Q7Z5N4 SUZ12P1-203ENST00000578195 985 ntBASIC29.02■■■□□ 2.24
SDK1Q7Z5N4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.01■■■□□ 2.24
SDK1Q7Z5N4 SETD8P1-201ENST00000623146 1180 ntBASIC29.01■■■□□ 2.23
SDK1Q7Z5N4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.99■■■□□ 2.23
SDK1Q7Z5N4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.96■■■□□ 2.23
SDK1Q7Z5N4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SDK1Q7Z5N4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.21
SDK1Q7Z5N4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.89■■■□□ 2.21
SDK1Q7Z5N4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
SDK1Q7Z5N4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SDK1Q7Z5N4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.86■■■□□ 2.21
SDK1Q7Z5N4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.86■■■□□ 2.21
SDK1Q7Z5N4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SDK1Q7Z5N4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.85■■■□□ 2.21
SDK1Q7Z5N4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.85■■■□□ 2.21
SDK1Q7Z5N4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SDK1Q7Z5N4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SDK1Q7Z5N4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.82■■■□□ 2.2
SDK1Q7Z5N4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
SDK1Q7Z5N4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
SDK1Q7Z5N4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SDK1Q7Z5N4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SDK1Q7Z5N4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
SDK1Q7Z5N4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
SDK1Q7Z5N4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
SDK1Q7Z5N4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SDK1Q7Z5N4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.63■■■□□ 2.17
SDK1Q7Z5N4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.63■■■□□ 2.17
SDK1Q7Z5N4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SDK1Q7Z5N4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SDK1Q7Z5N4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.61■■■□□ 2.17
SDK1Q7Z5N4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SDK1Q7Z5N4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.59■■■□□ 2.17
SDK1Q7Z5N4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
SDK1Q7Z5N4 AL162393.1-201ENST00000437852 946 ntBASIC28.49■■■□□ 2.15
SDK1Q7Z5N4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.48■■■□□ 2.15
SDK1Q7Z5N4 AC145285.7-201ENST00000614819 1539 ntBASIC28.48■■■□□ 2.15
SDK1Q7Z5N4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SDK1Q7Z5N4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SDK1Q7Z5N4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
SDK1Q7Z5N4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SDK1Q7Z5N4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.45■■■□□ 2.14
SDK1Q7Z5N4 CAHM-201ENST00000604200 896 ntBASIC28.39■■■□□ 2.14
SDK1Q7Z5N4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.39■■■□□ 2.14
SDK1Q7Z5N4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SDK1Q7Z5N4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.37■■■□□ 2.13
SDK1Q7Z5N4 AL391121.1-201ENST00000607967 1349 ntBASIC28.37■■■□□ 2.13
SDK1Q7Z5N4 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.37■■■□□ 2.13
SDK1Q7Z5N4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SDK1Q7Z5N4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
SDK1Q7Z5N4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SDK1Q7Z5N4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.34■■■□□ 2.13
SDK1Q7Z5N4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SDK1Q7Z5N4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SDK1Q7Z5N4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SDK1Q7Z5N4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SDK1Q7Z5N4 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.3■■■□□ 2.12
SDK1Q7Z5N4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SDK1Q7Z5N4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SDK1Q7Z5N4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
SDK1Q7Z5N4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.29■■■□□ 2.12
SDK1Q7Z5N4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SDK1Q7Z5N4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SDK1Q7Z5N4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.28■■■□□ 2.12
SDK1Q7Z5N4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SDK1Q7Z5N4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms