Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSMD3Q7Z407 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.95■□□□□ 0.94
CSMD3Q7Z407 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CSMD3Q7Z407 RARRES2P7-201ENST00000567349 469 ntBASIC20.92■□□□□ 0.94
CSMD3Q7Z407 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSMD3Q7Z407 AC136428.2-201ENST00000563187 214 ntBASIC20.91■□□□□ 0.94
CSMD3Q7Z407 AL031258.1-201ENST00000623562 325 ntBASIC20.9■□□□□ 0.94
CSMD3Q7Z407 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CSMD3Q7Z407 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CSMD3Q7Z407 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.88■□□□□ 0.93
CSMD3Q7Z407 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSMD3Q7Z407 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
CSMD3Q7Z407 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSMD3Q7Z407 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC20.86■□□□□ 0.93
CSMD3Q7Z407 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CSMD3Q7Z407 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSMD3Q7Z407 RPS2P35-201ENST00000443417 897 ntBASIC20.77■□□□□ 0.91
CSMD3Q7Z407 SUZ12P1-203ENST00000578195 985 ntBASIC20.74■□□□□ 0.91
CSMD3Q7Z407 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSMD3Q7Z407 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSMD3Q7Z407 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSMD3Q7Z407 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.68■□□□□ 0.9
CSMD3Q7Z407 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSMD3Q7Z407 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSMD3Q7Z407 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CSMD3Q7Z407 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CSMD3Q7Z407 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CSMD3Q7Z407 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.62■□□□□ 0.89
CSMD3Q7Z407 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSMD3Q7Z407 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.62■□□□□ 0.89
CSMD3Q7Z407 AC097358.2-201ENST00000607541 1159 ntBASIC20.6■□□□□ 0.89
CSMD3Q7Z407 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC20.58■□□□□ 0.88
CSMD3Q7Z407 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.56■□□□□ 0.88
CSMD3Q7Z407 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSMD3Q7Z407 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20.55■□□□□ 0.88
CSMD3Q7Z407 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSMD3Q7Z407 SETD8P1-201ENST00000623146 1180 ntBASIC20.54■□□□□ 0.88
CSMD3Q7Z407 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.54■□□□□ 0.88
CSMD3Q7Z407 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.52■□□□□ 0.88
CSMD3Q7Z407 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSMD3Q7Z407 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.51■□□□□ 0.87
CSMD3Q7Z407 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CSMD3Q7Z407 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.47■□□□□ 0.87
CSMD3Q7Z407 AL162393.1-201ENST00000437852 946 ntBASIC20.46■□□□□ 0.87
CSMD3Q7Z407 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.46■□□□□ 0.87
CSMD3Q7Z407 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSMD3Q7Z407 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.44■□□□□ 0.86
CSMD3Q7Z407 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.44■□□□□ 0.86
CSMD3Q7Z407 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSMD3Q7Z407 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.42■□□□□ 0.86
CSMD3Q7Z407 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSMD3Q7Z407 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.41■□□□□ 0.86
CSMD3Q7Z407 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CSMD3Q7Z407 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.38■□□□□ 0.85
CSMD3Q7Z407 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CSMD3Q7Z407 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSMD3Q7Z407 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.34■□□□□ 0.85
CSMD3Q7Z407 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CSMD3Q7Z407 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CSMD3Q7Z407 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.31■□□□□ 0.84
CSMD3Q7Z407 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CSMD3Q7Z407 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CSMD3Q7Z407 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSMD3Q7Z407 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSMD3Q7Z407 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSMD3Q7Z407 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSMD3Q7Z407 CAHM-201ENST00000604200 896 ntBASIC20.22■□□□□ 0.83
CSMD3Q7Z407 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CSMD3Q7Z407 AC145285.7-201ENST00000614819 1539 ntBASIC20.2■□□□□ 0.82
CSMD3Q7Z407 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSMD3Q7Z407 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.18■□□□□ 0.82
CSMD3Q7Z407 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CSMD3Q7Z407 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CSMD3Q7Z407 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CSMD3Q7Z407 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSMD3Q7Z407 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.17■□□□□ 0.82
CSMD3Q7Z407 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.17■□□□□ 0.82
CSMD3Q7Z407 AL391121.1-201ENST00000607967 1349 ntBASIC20.16■□□□□ 0.82
CSMD3Q7Z407 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSMD3Q7Z407 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSMD3Q7Z407 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.13■□□□□ 0.81
CSMD3Q7Z407 AP006261.1-201ENST00000584783 668 ntBASIC20.11■□□□□ 0.81
CSMD3Q7Z407 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CSMD3Q7Z407 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CSMD3Q7Z407 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.11■□□□□ 0.81
CSMD3Q7Z407 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CSMD3Q7Z407 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
CSMD3Q7Z407 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CSMD3Q7Z407 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CSMD3Q7Z407 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSMD3Q7Z407 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSMD3Q7Z407 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CSMD3Q7Z407 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSMD3Q7Z407 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSMD3Q7Z407 HLA-V-202ENST00000446817 847 ntBASIC20.03■□□□□ 0.8
CSMD3Q7Z407 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.03■□□□□ 0.8
CSMD3Q7Z407 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.01■□□□□ 0.79
CSMD3Q7Z407 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.01■□□□□ 0.79
CSMD3Q7Z407 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSMD3Q7Z407 ABHD17AP4-201ENST00000411545 909 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms