Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LRRK2Q5S007 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LRRK2Q5S007 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
LRRK2Q5S007 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
LRRK2Q5S007 AC136428.2-201ENST00000563187 214 ntBASIC26.43■■□□□ 1.82
LRRK2Q5S007 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.4■■□□□ 1.82
LRRK2Q5S007 SUZ12P1-203ENST00000578195 985 ntBASIC26.4■■□□□ 1.82
LRRK2Q5S007 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
LRRK2Q5S007 AC097358.2-201ENST00000607541 1159 ntBASIC26.39■■□□□ 1.81
LRRK2Q5S007 AL031258.1-201ENST00000623562 325 ntBASIC26.38■■□□□ 1.81
LRRK2Q5S007 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LRRK2Q5S007 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LRRK2Q5S007 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.35■■□□□ 1.81
LRRK2Q5S007 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LRRK2Q5S007 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LRRK2Q5S007 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LRRK2Q5S007 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.27■■□□□ 1.8
LRRK2Q5S007 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.27■■□□□ 1.8
LRRK2Q5S007 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LRRK2Q5S007 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
LRRK2Q5S007 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
LRRK2Q5S007 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LRRK2Q5S007 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
LRRK2Q5S007 SETD8P1-201ENST00000623146 1180 ntBASIC26.14■■□□□ 1.78
LRRK2Q5S007 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
LRRK2Q5S007 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LRRK2Q5S007 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.1■■□□□ 1.77
LRRK2Q5S007 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
LRRK2Q5S007 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LRRK2Q5S007 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.07■■□□□ 1.76
LRRK2Q5S007 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
LRRK2Q5S007 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.06■■□□□ 1.76
LRRK2Q5S007 AL162393.1-201ENST00000437852 946 ntBASIC26.06■■□□□ 1.76
LRRK2Q5S007 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26■■□□□ 1.75
LRRK2Q5S007 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26■■□□□ 1.75
LRRK2Q5S007 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.99■■□□□ 1.75
LRRK2Q5S007 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.98■■□□□ 1.75
LRRK2Q5S007 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.97■■□□□ 1.75
LRRK2Q5S007 AP006261.1-201ENST00000584783 668 ntBASIC25.96■■□□□ 1.75
LRRK2Q5S007 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
LRRK2Q5S007 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LRRK2Q5S007 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
LRRK2Q5S007 HLA-V-202ENST00000446817 847 ntBASIC25.93■■□□□ 1.74
LRRK2Q5S007 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.92■■□□□ 1.74
LRRK2Q5S007 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
LRRK2Q5S007 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.91■■□□□ 1.74
LRRK2Q5S007 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC25.91■■□□□ 1.74
LRRK2Q5S007 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
LRRK2Q5S007 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.9■■□□□ 1.74
LRRK2Q5S007 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LRRK2Q5S007 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
LRRK2Q5S007 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
LRRK2Q5S007 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.82■■□□□ 1.72
LRRK2Q5S007 MIR7108-201ENST00000614319 87 ntBASIC25.82■■□□□ 1.72
LRRK2Q5S007 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LRRK2Q5S007 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.81■■□□□ 1.72
LRRK2Q5S007 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
LRRK2Q5S007 ABHD17AP4-201ENST00000411545 909 ntBASIC25.76■■□□□ 1.71
LRRK2Q5S007 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LRRK2Q5S007 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LRRK2Q5S007 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LRRK2Q5S007 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
LRRK2Q5S007 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC25.75■■□□□ 1.71
LRRK2Q5S007 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
LRRK2Q5S007 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.71■■□□□ 1.71
LRRK2Q5S007 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
LRRK2Q5S007 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.7■■□□□ 1.7
LRRK2Q5S007 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.7■■□□□ 1.7
LRRK2Q5S007 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LRRK2Q5S007 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LRRK2Q5S007 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LRRK2Q5S007 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.68■■□□□ 1.7
LRRK2Q5S007 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
LRRK2Q5S007 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LRRK2Q5S007 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LRRK2Q5S007 AL391121.1-201ENST00000607967 1349 ntBASIC25.62■■□□□ 1.69
LRRK2Q5S007 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
LRRK2Q5S007 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
LRRK2Q5S007 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.59■■□□□ 1.69
LRRK2Q5S007 CAHM-201ENST00000604200 896 ntBASIC25.59■■□□□ 1.69
LRRK2Q5S007 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
LRRK2Q5S007 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
LRRK2Q5S007 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC25.57■■□□□ 1.68
LRRK2Q5S007 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
LRRK2Q5S007 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.57■■□□□ 1.68
LRRK2Q5S007 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.57■■□□□ 1.68
LRRK2Q5S007 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC25.56■■□□□ 1.68
LRRK2Q5S007 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
LRRK2Q5S007 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.52■■□□□ 1.68
LRRK2Q5S007 MIR3665-201ENST00000578708 105 ntBASIC25.48■■□□□ 1.67
LRRK2Q5S007 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.48■■□□□ 1.67
LRRK2Q5S007 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
LRRK2Q5S007 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
LRRK2Q5S007 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.44■■□□□ 1.66
LRRK2Q5S007 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRRK2Q5S007 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
LRRK2Q5S007 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.4■■□□□ 1.66
LRRK2Q5S007 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRRK2Q5S007 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.35■■□□□ 1.65
LRRK2Q5S007 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms