Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 RARRES2P7-201ENST00000567349 469 ntBASIC32.67■■■□□ 2.82
LRIT3Q3SXY7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
LRIT3Q3SXY7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
LRIT3Q3SXY7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
LRIT3Q3SXY7 AC097358.2-201ENST00000607541 1159 ntBASIC32.53■■■□□ 2.8
LRIT3Q3SXY7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
LRIT3Q3SXY7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
LRIT3Q3SXY7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
LRIT3Q3SXY7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
LRIT3Q3SXY7 SUZ12P1-203ENST00000578195 985 ntBASIC32.41■■■□□ 2.78
LRIT3Q3SXY7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
LRIT3Q3SXY7 AC136428.2-201ENST00000563187 214 ntBASIC32.38■■■□□ 2.77
LRIT3Q3SXY7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.33■■■□□ 2.77
LRIT3Q3SXY7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.29■■■□□ 2.76
LRIT3Q3SXY7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
LRIT3Q3SXY7 SETD8P1-201ENST00000623146 1180 ntBASIC32.23■■■□□ 2.75
LRIT3Q3SXY7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
LRIT3Q3SXY7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
LRIT3Q3SXY7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
LRIT3Q3SXY7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
LRIT3Q3SXY7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
LRIT3Q3SXY7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
LRIT3Q3SXY7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.16■■■□□ 2.74
LRIT3Q3SXY7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.15■■■□□ 2.74
LRIT3Q3SXY7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.12■■■□□ 2.73
LRIT3Q3SXY7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.11■■■□□ 2.73
LRIT3Q3SXY7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
LRIT3Q3SXY7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
LRIT3Q3SXY7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
LRIT3Q3SXY7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.04■■■□□ 2.72
LRIT3Q3SXY7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.03■■■□□ 2.72
LRIT3Q3SXY7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.99■■■□□ 2.71
LRIT3Q3SXY7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
LRIT3Q3SXY7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
LRIT3Q3SXY7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.95■■■□□ 2.71
LRIT3Q3SXY7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.95■■■□□ 2.71
LRIT3Q3SXY7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
LRIT3Q3SXY7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.93■■■□□ 2.7
LRIT3Q3SXY7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.91■■■□□ 2.7
LRIT3Q3SXY7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
LRIT3Q3SXY7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
LRIT3Q3SXY7 AL162393.1-201ENST00000437852 946 ntBASIC31.88■■■□□ 2.69
LRIT3Q3SXY7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.88■■■□□ 2.69
LRIT3Q3SXY7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LRIT3Q3SXY7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LRIT3Q3SXY7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.86■■■□□ 2.69
LRIT3Q3SXY7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.85■■■□□ 2.69
LRIT3Q3SXY7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
LRIT3Q3SXY7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.83■■■□□ 2.69
LRIT3Q3SXY7 MIR7108-201ENST00000614319 87 ntBASIC31.8■■■□□ 2.68
LRIT3Q3SXY7 AP006261.1-201ENST00000584783 668 ntBASIC31.79■■■□□ 2.68
LRIT3Q3SXY7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.79■■■□□ 2.68
LRIT3Q3SXY7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.75■■■□□ 2.67
LRIT3Q3SXY7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
LRIT3Q3SXY7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
LRIT3Q3SXY7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
LRIT3Q3SXY7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
LRIT3Q3SXY7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.7■■■□□ 2.67
LRIT3Q3SXY7 ABHD17AP4-201ENST00000411545 909 ntBASIC31.69■■■□□ 2.66
LRIT3Q3SXY7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
LRIT3Q3SXY7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
LRIT3Q3SXY7 CAHM-201ENST00000604200 896 ntBASIC31.6■■■□□ 2.65
LRIT3Q3SXY7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.58■■■□□ 2.65
LRIT3Q3SXY7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.57■■■□□ 2.64
LRIT3Q3SXY7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.56■■■□□ 2.64
LRIT3Q3SXY7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.54■■■□□ 2.64
LRIT3Q3SXY7 HLA-V-202ENST00000446817 847 ntBASIC31.53■■■□□ 2.64
LRIT3Q3SXY7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.53■■■□□ 2.64
LRIT3Q3SXY7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
LRIT3Q3SXY7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
LRIT3Q3SXY7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
LRIT3Q3SXY7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
LRIT3Q3SXY7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
LRIT3Q3SXY7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
LRIT3Q3SXY7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
LRIT3Q3SXY7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.46■■■□□ 2.63
LRIT3Q3SXY7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.45■■■□□ 2.63
LRIT3Q3SXY7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.45■■■□□ 2.63
LRIT3Q3SXY7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
LRIT3Q3SXY7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
LRIT3Q3SXY7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
LRIT3Q3SXY7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.42■■■□□ 2.62
LRIT3Q3SXY7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
LRIT3Q3SXY7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
LRIT3Q3SXY7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
LRIT3Q3SXY7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
LRIT3Q3SXY7 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.37■■■□□ 2.61
LRIT3Q3SXY7 AL391121.1-201ENST00000607967 1349 ntBASIC31.35■■■□□ 2.61
LRIT3Q3SXY7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
LRIT3Q3SXY7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.33■■■□□ 2.61
LRIT3Q3SXY7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.3■■■□□ 2.6
LRIT3Q3SXY7 MIR3665-201ENST00000578708 105 ntBASIC31.3■■■□□ 2.6
LRIT3Q3SXY7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LRIT3Q3SXY7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.29■■■□□ 2.6
LRIT3Q3SXY7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
LRIT3Q3SXY7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
LRIT3Q3SXY7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.22■■■□□ 2.59
LRIT3Q3SXY7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
LRIT3Q3SXY7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.19■■■□□ 2.58
LRIT3Q3SXY7 AC087741.3-201ENST00000624270 1347 ntBASIC31.18■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms