Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
HTRA3P83110 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.87■■■■□ 3.33
HTRA3P83110 SUZ12P1-203ENST00000578195 985 ntBASIC35.8■■■■□ 3.32
HTRA3P83110 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC35.73■■■■□ 3.31
HTRA3P83110 AC136428.2-201ENST00000563187 214 ntBASIC35.73■■■■□ 3.31
HTRA3P83110 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC35.7■■■■□ 3.31
HTRA3P83110 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
HTRA3P83110 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
HTRA3P83110 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC35.59■■■■□ 3.29
HTRA3P83110 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
HTRA3P83110 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
HTRA3P83110 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
HTRA3P83110 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
HTRA3P83110 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC35.5■■■■□ 3.27
HTRA3P83110 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC35.49■■■■□ 3.27
HTRA3P83110 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
HTRA3P83110 SETD8P1-201ENST00000623146 1180 ntBASIC35.49■■■■□ 3.27
HTRA3P83110 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
HTRA3P83110 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC35.47■■■■□ 3.27
HTRA3P83110 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC35.46■■■■□ 3.27
HTRA3P83110 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
HTRA3P83110 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC35.43■■■■□ 3.26
HTRA3P83110 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC35.41■■■■□ 3.26
HTRA3P83110 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC35.37■■■■□ 3.25
HTRA3P83110 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC35.36■■■■□ 3.25
HTRA3P83110 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC35.36■■■■□ 3.25
HTRA3P83110 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
HTRA3P83110 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
HTRA3P83110 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
HTRA3P83110 MIR7108-201ENST00000614319 87 ntBASIC35.27■■■■□ 3.24
HTRA3P83110 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
HTRA3P83110 AL162393.1-201ENST00000437852 946 ntBASIC35.24■■■■□ 3.23
HTRA3P83110 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC35.23■■■■□ 3.23
HTRA3P83110 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC35.21■■■■□ 3.23
HTRA3P83110 PVT1-219ENST00000523427 938 ntTSL 3 BASIC35.2■■■■□ 3.23
HTRA3P83110 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
HTRA3P83110 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC35.16■■■■□ 3.22
HTRA3P83110 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
HTRA3P83110 NRG1-221ENST00000614767 762 ntTSL 5 BASIC35.14■■■■□ 3.22
HTRA3P83110 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC35.12■■■■□ 3.21
HTRA3P83110 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
HTRA3P83110 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
HTRA3P83110 MBP-237ENST00000579129 1052 ntTSL 5 BASIC35.08■■■■□ 3.21
HTRA3P83110 ABHD17AP4-201ENST00000411545 909 ntBASIC35.07■■■■□ 3.2
HTRA3P83110 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC35.06■■■■□ 3.2
HTRA3P83110 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC35.05■■■■□ 3.2
HTRA3P83110 KLF16-203ENST00000592313 508 ntTSL 3 BASIC35.03■■■■□ 3.2
HTRA3P83110 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
HTRA3P83110 HLA-V-202ENST00000446817 847 ntBASIC35.01■■■■□ 3.2
HTRA3P83110 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
HTRA3P83110 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC34.96■■■■□ 3.19
HTRA3P83110 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC34.96■■■■□ 3.19
HTRA3P83110 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC34.95■■■■□ 3.19
HTRA3P83110 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC34.9■■■■□ 3.18
HTRA3P83110 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
HTRA3P83110 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
HTRA3P83110 AP006261.1-201ENST00000584783 668 ntBASIC34.82■■■■□ 3.16
HTRA3P83110 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
HTRA3P83110 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
HTRA3P83110 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC34.8■■■■□ 3.16
HTRA3P83110 CAHM-201ENST00000604200 896 ntBASIC34.8■■■■□ 3.16
HTRA3P83110 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC34.79■■■■□ 3.16
HTRA3P83110 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC34.79■■■■□ 3.16
HTRA3P83110 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
HTRA3P83110 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC34.76■■■■□ 3.16
HTRA3P83110 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
HTRA3P83110 EBPL-203ENST00000378270 579 ntTSL 2 BASIC34.7■■■■□ 3.15
HTRA3P83110 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
HTRA3P83110 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC34.61■■■■□ 3.13
HTRA3P83110 MLEC-202ENST00000412616 841 ntTSL 3 BASIC34.58■■■■□ 3.13
HTRA3P83110 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC34.57■■■■□ 3.12
HTRA3P83110 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC34.56■■■■□ 3.12
HTRA3P83110 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
HTRA3P83110 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
HTRA3P83110 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC34.55■■■■□ 3.12
HTRA3P83110 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
HTRA3P83110 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
HTRA3P83110 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC34.5■■■■□ 3.11
HTRA3P83110 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC34.5■■■■□ 3.11
HTRA3P83110 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
HTRA3P83110 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
HTRA3P83110 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
HTRA3P83110 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC34.48■■■■□ 3.11
HTRA3P83110 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.47■■■■□ 3.11
HTRA3P83110 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
HTRA3P83110 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC34.46■■■■□ 3.11
HTRA3P83110 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
HTRA3P83110 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.43■■■■□ 3.1
HTRA3P83110 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.42■■■■□ 3.1
HTRA3P83110 HNRNPLP2-201ENST00000568980 1570 ntBASIC34.41■■■■□ 3.1
HTRA3P83110 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
HTRA3P83110 AL391121.1-201ENST00000607967 1349 ntBASIC34.4■■■■□ 3.1
HTRA3P83110 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
HTRA3P83110 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC34.38■■■■□ 3.09
HTRA3P83110 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC34.36■■■■□ 3.09
HTRA3P83110 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC34.35■■■■□ 3.09
HTRA3P83110 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC34.33■■■■□ 3.09
HTRA3P83110 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC34.31■■■■□ 3.08
HTRA3P83110 AC087741.3-201ENST00000624270 1347 ntBASIC34.3■■■■□ 3.08
HTRA3P83110 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC34.29■■■■□ 3.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms