Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 MIR4466-201ENST00000606121 54 ntBASIC28.49■■■□□ 2.15
PCDHAC2Q9Y5I4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PCDHAC2Q9Y5I4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
PCDHAC2Q9Y5I4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PCDHAC2Q9Y5I4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PCDHAC2Q9Y5I4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC28.48■■■□□ 2.15
PCDHAC2Q9Y5I4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PCDHAC2Q9Y5I4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.48■■■□□ 2.15
PCDHAC2Q9Y5I4 MIR3621-201ENST00000580529 85 ntBASIC28.48■■■□□ 2.15
PCDHAC2Q9Y5I4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.48■■■□□ 2.15
PCDHAC2Q9Y5I4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCDHAC2Q9Y5I4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PCDHAC2Q9Y5I4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC28.47■■■□□ 2.15
PCDHAC2Q9Y5I4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC28.47■■■□□ 2.15
PCDHAC2Q9Y5I4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
PCDHAC2Q9Y5I4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.47■■■□□ 2.15
PCDHAC2Q9Y5I4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PCDHAC2Q9Y5I4 AF131216.4-201ENST00000638924 1588 ntBASIC28.46■■■□□ 2.15
PCDHAC2Q9Y5I4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC28.46■■■□□ 2.15
PCDHAC2Q9Y5I4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC28.46■■■□□ 2.15
PCDHAC2Q9Y5I4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHAC2Q9Y5I4 MTDHP2-201ENST00000601468 714 ntBASIC28.46■■■□□ 2.15
PCDHAC2Q9Y5I4 AC110285.6-201ENST00000617652 491 ntBASIC28.46■■■□□ 2.15
PCDHAC2Q9Y5I4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.45■■■□□ 2.15
PCDHAC2Q9Y5I4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
PCDHAC2Q9Y5I4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
PCDHAC2Q9Y5I4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
PCDHAC2Q9Y5I4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC28.45■■■□□ 2.14
PCDHAC2Q9Y5I4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC28.45■■■□□ 2.14
PCDHAC2Q9Y5I4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC28.45■■■□□ 2.14
PCDHAC2Q9Y5I4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.45■■■□□ 2.14
PCDHAC2Q9Y5I4 MIR6724-1-201ENST00000616420 92 ntBASIC28.45■■■□□ 2.14
PCDHAC2Q9Y5I4 MIR6724-2-201ENST00000616483 92 ntBASIC28.45■■■□□ 2.14
PCDHAC2Q9Y5I4 MIR6724-4-201ENST00000617390 92 ntBASIC28.45■■■□□ 2.14
PCDHAC2Q9Y5I4 MIR6724-3-201ENST00000622482 92 ntBASIC28.45■■■□□ 2.14
PCDHAC2Q9Y5I4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC28.44■■■□□ 2.14
PCDHAC2Q9Y5I4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDHAC2Q9Y5I4 AC011551.1-201ENST00000614101 683 ntBASIC28.44■■■□□ 2.14
PCDHAC2Q9Y5I4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDHAC2Q9Y5I4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDHAC2Q9Y5I4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHAC2Q9Y5I4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.43■■■□□ 2.14
PCDHAC2Q9Y5I4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
PCDHAC2Q9Y5I4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHAC2Q9Y5I4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHAC2Q9Y5I4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHAC2Q9Y5I4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHAC2Q9Y5I4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHAC2Q9Y5I4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC28.43■■■□□ 2.14
PCDHAC2Q9Y5I4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC28.43■■■□□ 2.14
PCDHAC2Q9Y5I4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHAC2Q9Y5I4 RASSF1-AS1-201ENST00000629828 790 ntBASIC28.43■■■□□ 2.14
PCDHAC2Q9Y5I4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHAC2Q9Y5I4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDHAC2Q9Y5I4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDHAC2Q9Y5I4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC28.42■■■□□ 2.14
PCDHAC2Q9Y5I4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDHAC2Q9Y5I4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHAC2Q9Y5I4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHAC2Q9Y5I4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDHAC2Q9Y5I4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHAC2Q9Y5I4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.4■■■□□ 2.14
PCDHAC2Q9Y5I4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHAC2Q9Y5I4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC28.4■■■□□ 2.14
PCDHAC2Q9Y5I4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDHAC2Q9Y5I4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.4■■■□□ 2.14
PCDHAC2Q9Y5I4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
PCDHAC2Q9Y5I4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCDHAC2Q9Y5I4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
PCDHAC2Q9Y5I4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
PCDHAC2Q9Y5I4 AL512631.2-201ENST00000604634 923 ntBASIC28.39■■■□□ 2.14
PCDHAC2Q9Y5I4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCDHAC2Q9Y5I4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHAC2Q9Y5I4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC28.38■■■□□ 2.13
PCDHAC2Q9Y5I4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHAC2Q9Y5I4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PCDHAC2Q9Y5I4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
PCDHAC2Q9Y5I4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC28.37■■■□□ 2.13
PCDHAC2Q9Y5I4 AC096631.2-201ENST00000436136 790 ntBASIC28.37■■■□□ 2.13
PCDHAC2Q9Y5I4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC28.37■■■□□ 2.13
PCDHAC2Q9Y5I4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC28.37■■■□□ 2.13
PCDHAC2Q9Y5I4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC28.37■■■□□ 2.13
PCDHAC2Q9Y5I4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHAC2Q9Y5I4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC28.37■■■□□ 2.13
PCDHAC2Q9Y5I4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
PCDHAC2Q9Y5I4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
PCDHAC2Q9Y5I4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC28.36■■■□□ 2.13
PCDHAC2Q9Y5I4 FOXO3B-201ENST00000395675 1928 ntBASIC28.35■■■□□ 2.13
PCDHAC2Q9Y5I4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.35■■■□□ 2.13
PCDHAC2Q9Y5I4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHAC2Q9Y5I4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC28.35■■■□□ 2.13
PCDHAC2Q9Y5I4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC28.35■■■□□ 2.13
PCDHAC2Q9Y5I4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHAC2Q9Y5I4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC28.34■■■□□ 2.13
PCDHAC2Q9Y5I4 AL356740.2-201ENST00000601559 647 ntBASIC28.34■■■□□ 2.13
PCDHAC2Q9Y5I4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC28.34■■■□□ 2.13
PCDHAC2Q9Y5I4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHAC2Q9Y5I4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
PCDHAC2Q9Y5I4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
PCDHAC2Q9Y5I4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms