Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ALMS1Q8TCU4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ALMS1Q8TCU4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.27■□□□□ 0.19
ALMS1Q8TCU4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.27■□□□□ 0.19
ALMS1Q8TCU4 SNX5-217ENST00000606557 1087 ntBASIC16.27■□□□□ 0.19
ALMS1Q8TCU4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.27■□□□□ 0.19
ALMS1Q8TCU4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ALMS1Q8TCU4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ALMS1Q8TCU4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ALMS1Q8TCU4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ALMS1Q8TCU4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.26■□□□□ 0.19
ALMS1Q8TCU4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.26■□□□□ 0.19
ALMS1Q8TCU4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.26■□□□□ 0.19
ALMS1Q8TCU4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
ALMS1Q8TCU4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ALMS1Q8TCU4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ALMS1Q8TCU4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ALMS1Q8TCU4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.25■□□□□ 0.19
ALMS1Q8TCU4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.25■□□□□ 0.19
ALMS1Q8TCU4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.25■□□□□ 0.19
ALMS1Q8TCU4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ALMS1Q8TCU4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.25■□□□□ 0.19
ALMS1Q8TCU4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ALMS1Q8TCU4 EDA-201ENST00000338901 1233 ntBASIC16.25■□□□□ 0.19
ALMS1Q8TCU4 CA15P2-201ENST00000611168 834 ntBASIC16.25■□□□□ 0.19
ALMS1Q8TCU4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ALMS1Q8TCU4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ALMS1Q8TCU4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ALMS1Q8TCU4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ALMS1Q8TCU4 BX255925.1-201ENST00000566954 1854 ntBASIC16.23■□□□□ 0.19
ALMS1Q8TCU4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALMS1Q8TCU4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.23■□□□□ 0.19
ALMS1Q8TCU4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.23■□□□□ 0.19
ALMS1Q8TCU4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ALMS1Q8TCU4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ALMS1Q8TCU4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC16.23■□□□□ 0.19
ALMS1Q8TCU4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ALMS1Q8TCU4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.23■□□□□ 0.19
ALMS1Q8TCU4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.23■□□□□ 0.19
ALMS1Q8TCU4 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.23■□□□□ 0.19
ALMS1Q8TCU4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ALMS1Q8TCU4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
ALMS1Q8TCU4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.22■□□□□ 0.19
ALMS1Q8TCU4 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.22■□□□□ 0.19
ALMS1Q8TCU4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALMS1Q8TCU4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALMS1Q8TCU4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.21■□□□□ 0.19
ALMS1Q8TCU4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALMS1Q8TCU4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC16.21■□□□□ 0.19
ALMS1Q8TCU4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.21■□□□□ 0.19
ALMS1Q8TCU4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC16.21■□□□□ 0.19
ALMS1Q8TCU4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALMS1Q8TCU4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ALMS1Q8TCU4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ALMS1Q8TCU4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.2■□□□□ 0.18
ALMS1Q8TCU4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.2■□□□□ 0.18
ALMS1Q8TCU4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ALMS1Q8TCU4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ALMS1Q8TCU4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALMS1Q8TCU4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALMS1Q8TCU4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
ALMS1Q8TCU4 AC091305.1-201ENST00000479476 895 ntBASIC16.2■□□□□ 0.18
ALMS1Q8TCU4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ALMS1Q8TCU4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ALMS1Q8TCU4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ALMS1Q8TCU4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
ALMS1Q8TCU4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ALMS1Q8TCU4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.19■□□□□ 0.18
ALMS1Q8TCU4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALMS1Q8TCU4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ALMS1Q8TCU4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALMS1Q8TCU4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC16.19■□□□□ 0.18
ALMS1Q8TCU4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ALMS1Q8TCU4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ALMS1Q8TCU4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALMS1Q8TCU4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALMS1Q8TCU4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.18■□□□□ 0.18
ALMS1Q8TCU4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.18■□□□□ 0.18
ALMS1Q8TCU4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ALMS1Q8TCU4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALMS1Q8TCU4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALMS1Q8TCU4 RASA4CP-201ENST00000424092 1398 ntBASIC16.18■□□□□ 0.18
ALMS1Q8TCU4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ALMS1Q8TCU4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.17■□□□□ 0.18
ALMS1Q8TCU4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ALMS1Q8TCU4 SRD5A1P1-201ENST00000442297 786 ntBASIC16.17■□□□□ 0.18
ALMS1Q8TCU4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ALMS1Q8TCU4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ALMS1Q8TCU4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALMS1Q8TCU4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ALMS1Q8TCU4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.16■□□□□ 0.18
ALMS1Q8TCU4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALMS1Q8TCU4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
ALMS1Q8TCU4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ALMS1Q8TCU4 AC034268.1-201ENST00000441047 882 ntBASIC16.16■□□□□ 0.18
ALMS1Q8TCU4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
ALMS1Q8TCU4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.15■□□□□ 0.18
ALMS1Q8TCU4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.15■□□□□ 0.18
ALMS1Q8TCU4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ALMS1Q8TCU4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms