Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.88■■□□□ 1.57
SHKBP1Q8TBC3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SHKBP1Q8TBC3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.87■■□□□ 1.57
SHKBP1Q8TBC3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SHKBP1Q8TBC3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SHKBP1Q8TBC3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.87■■□□□ 1.57
SHKBP1Q8TBC3 MIR4281-201ENST00000580852 62 ntBASIC24.87■■□□□ 1.57
SHKBP1Q8TBC3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.87■■□□□ 1.57
SHKBP1Q8TBC3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.86■■□□□ 1.57
SHKBP1Q8TBC3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SHKBP1Q8TBC3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.86■■□□□ 1.57
SHKBP1Q8TBC3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.86■■□□□ 1.57
SHKBP1Q8TBC3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SHKBP1Q8TBC3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SHKBP1Q8TBC3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
SHKBP1Q8TBC3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SHKBP1Q8TBC3 KRT16P3-201ENST00000439127 1283 ntBASIC24.85■■□□□ 1.57
SHKBP1Q8TBC3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.85■■□□□ 1.57
SHKBP1Q8TBC3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SHKBP1Q8TBC3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SHKBP1Q8TBC3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SHKBP1Q8TBC3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SHKBP1Q8TBC3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SHKBP1Q8TBC3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.84■■□□□ 1.57
SHKBP1Q8TBC3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.84■■□□□ 1.57
SHKBP1Q8TBC3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
SHKBP1Q8TBC3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
SHKBP1Q8TBC3 TSPY9P-201ENST00000440215 945 ntBASIC24.84■■□□□ 1.57
SHKBP1Q8TBC3 TSPY11P-201ENST00000442607 1045 ntBASIC24.84■■□□□ 1.57
SHKBP1Q8TBC3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.83■■□□□ 1.57
SHKBP1Q8TBC3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SHKBP1Q8TBC3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.83■■□□□ 1.57
SHKBP1Q8TBC3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.83■■□□□ 1.57
SHKBP1Q8TBC3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SHKBP1Q8TBC3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SHKBP1Q8TBC3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
SHKBP1Q8TBC3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.82■■□□□ 1.56
SHKBP1Q8TBC3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.82■■□□□ 1.56
SHKBP1Q8TBC3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.82■■□□□ 1.56
SHKBP1Q8TBC3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHKBP1Q8TBC3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.81■■□□□ 1.56
SHKBP1Q8TBC3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHKBP1Q8TBC3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.81■■□□□ 1.56
SHKBP1Q8TBC3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHKBP1Q8TBC3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHKBP1Q8TBC3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
SHKBP1Q8TBC3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
SHKBP1Q8TBC3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SHKBP1Q8TBC3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SHKBP1Q8TBC3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.8■■□□□ 1.56
SHKBP1Q8TBC3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.8■■□□□ 1.56
SHKBP1Q8TBC3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.8■■□□□ 1.56
SHKBP1Q8TBC3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
SHKBP1Q8TBC3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SHKBP1Q8TBC3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SHKBP1Q8TBC3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SHKBP1Q8TBC3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
SHKBP1Q8TBC3 AC092028.1-203ENST00000608262 953 ntBASIC24.79■■□□□ 1.56
SHKBP1Q8TBC3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.79■■□□□ 1.56
SHKBP1Q8TBC3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.79■■□□□ 1.56
SHKBP1Q8TBC3 AC019069.1-201ENST00000610008 1333 ntBASIC24.79■■□□□ 1.56
SHKBP1Q8TBC3 AC008406.3-201ENST00000620001 1374 ntBASIC24.79■■□□□ 1.56
SHKBP1Q8TBC3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SHKBP1Q8TBC3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SHKBP1Q8TBC3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SHKBP1Q8TBC3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SHKBP1Q8TBC3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.78■■□□□ 1.56
SHKBP1Q8TBC3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.77■■□□□ 1.56
SHKBP1Q8TBC3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SHKBP1Q8TBC3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.77■■□□□ 1.56
SHKBP1Q8TBC3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.77■■□□□ 1.56
SHKBP1Q8TBC3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.77■■□□□ 1.56
SHKBP1Q8TBC3 AC011551.1-201ENST00000614101 683 ntBASIC24.77■■□□□ 1.56
SHKBP1Q8TBC3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
SHKBP1Q8TBC3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.76■■□□□ 1.55
SHKBP1Q8TBC3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
SHKBP1Q8TBC3 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.76■■□□□ 1.55
SHKBP1Q8TBC3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SHKBP1Q8TBC3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SHKBP1Q8TBC3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SHKBP1Q8TBC3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.75■■□□□ 1.55
SHKBP1Q8TBC3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SHKBP1Q8TBC3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SHKBP1Q8TBC3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.75■■□□□ 1.55
SHKBP1Q8TBC3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SHKBP1Q8TBC3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.75■■□□□ 1.55
SHKBP1Q8TBC3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.75■■□□□ 1.55
SHKBP1Q8TBC3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SHKBP1Q8TBC3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SHKBP1Q8TBC3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
SHKBP1Q8TBC3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SHKBP1Q8TBC3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
SHKBP1Q8TBC3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SHKBP1Q8TBC3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SHKBP1Q8TBC3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SHKBP1Q8TBC3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.74■■□□□ 1.55
SHKBP1Q8TBC3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
SHKBP1Q8TBC3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
SHKBP1Q8TBC3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SHKBP1Q8TBC3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms