Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.58■□□□□ 0.56
LINC01006Q8NI28 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LINC01006Q8NI28 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LINC01006Q8NI28 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.58■□□□□ 0.56
LINC01006Q8NI28 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LINC01006Q8NI28 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.58■□□□□ 0.56
LINC01006Q8NI28 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LINC01006Q8NI28 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.58■□□□□ 0.56
LINC01006Q8NI28 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LINC01006Q8NI28 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01006Q8NI28 AL356740.2-201ENST00000601559 647 ntBASIC18.57■□□□□ 0.56
LINC01006Q8NI28 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01006Q8NI28 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.57■□□□□ 0.56
LINC01006Q8NI28 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01006Q8NI28 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LINC01006Q8NI28 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC01006Q8NI28 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
LINC01006Q8NI28 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.56■□□□□ 0.56
LINC01006Q8NI28 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01006Q8NI28 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01006Q8NI28 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01006Q8NI28 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01006Q8NI28 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.56■□□□□ 0.56
LINC01006Q8NI28 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.56■□□□□ 0.56
LINC01006Q8NI28 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.56■□□□□ 0.56
LINC01006Q8NI28 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.56■□□□□ 0.56
LINC01006Q8NI28 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LINC01006Q8NI28 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.56■□□□□ 0.56
LINC01006Q8NI28 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01006Q8NI28 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01006Q8NI28 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01006Q8NI28 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01006Q8NI28 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC01006Q8NI28 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01006Q8NI28 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01006Q8NI28 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC01006Q8NI28 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC01006Q8NI28 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01006Q8NI28 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LINC01006Q8NI28 FOXO3B-201ENST00000395675 1928 ntBASIC18.54■□□□□ 0.56
LINC01006Q8NI28 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.54■□□□□ 0.56
LINC01006Q8NI28 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01006Q8NI28 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
LINC01006Q8NI28 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC01006Q8NI28 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01006Q8NI28 AF131216.4-201ENST00000638924 1588 ntBASIC18.53■□□□□ 0.56
LINC01006Q8NI28 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01006Q8NI28 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01006Q8NI28 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01006Q8NI28 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01006Q8NI28 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01006Q8NI28 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01006Q8NI28 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.52■□□□□ 0.56
LINC01006Q8NI28 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.52■□□□□ 0.55
LINC01006Q8NI28 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.51■□□□□ 0.55
LINC01006Q8NI28 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01006Q8NI28 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC01006Q8NI28 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.51■□□□□ 0.55
LINC01006Q8NI28 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01006Q8NI28 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01006Q8NI28 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01006Q8NI28 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LINC01006Q8NI28 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.5■□□□□ 0.55
LINC01006Q8NI28 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.5■□□□□ 0.55
LINC01006Q8NI28 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01006Q8NI28 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC01006Q8NI28 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01006Q8NI28 MIR4466-201ENST00000606121 54 ntBASIC18.5■□□□□ 0.55
LINC01006Q8NI28 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC01006Q8NI28 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01006Q8NI28 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01006Q8NI28 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01006Q8NI28 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01006Q8NI28 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01006Q8NI28 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.49■□□□□ 0.55
LINC01006Q8NI28 AC110285.6-201ENST00000617652 491 ntBASIC18.49■□□□□ 0.55
LINC01006Q8NI28 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01006Q8NI28 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01006Q8NI28 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC01006Q8NI28 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01006Q8NI28 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01006Q8NI28 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.48■□□□□ 0.55
LINC01006Q8NI28 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LINC01006Q8NI28 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01006Q8NI28 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms