Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
KRT78Q8N1N4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.72■■□□□ 1.23
KRT78Q8N1N4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
KRT78Q8N1N4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.72■■□□□ 1.23
KRT78Q8N1N4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.72■■□□□ 1.23
KRT78Q8N1N4 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.72■■□□□ 1.23
KRT78Q8N1N4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
KRT78Q8N1N4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
KRT78Q8N1N4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
KRT78Q8N1N4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.72■■□□□ 1.23
KRT78Q8N1N4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
KRT78Q8N1N4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
KRT78Q8N1N4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.71■■□□□ 1.23
KRT78Q8N1N4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
KRT78Q8N1N4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.71■■□□□ 1.23
KRT78Q8N1N4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
KRT78Q8N1N4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
KRT78Q8N1N4 FOXO3B-201ENST00000395675 1928 ntBASIC22.7■■□□□ 1.23
KRT78Q8N1N4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
KRT78Q8N1N4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
KRT78Q8N1N4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
KRT78Q8N1N4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
KRT78Q8N1N4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
KRT78Q8N1N4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
KRT78Q8N1N4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
KRT78Q8N1N4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
KRT78Q8N1N4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
KRT78Q8N1N4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
KRT78Q8N1N4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.69■■□□□ 1.22
KRT78Q8N1N4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
KRT78Q8N1N4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.69■■□□□ 1.22
KRT78Q8N1N4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
KRT78Q8N1N4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
KRT78Q8N1N4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
KRT78Q8N1N4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
KRT78Q8N1N4 DUX4L18-201ENST00000553347 1267 ntBASIC22.68■■□□□ 1.22
KRT78Q8N1N4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.68■■□□□ 1.22
KRT78Q8N1N4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.68■■□□□ 1.22
KRT78Q8N1N4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.68■■□□□ 1.22
KRT78Q8N1N4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
KRT78Q8N1N4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.68■■□□□ 1.22
KRT78Q8N1N4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
KRT78Q8N1N4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT78Q8N1N4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
KRT78Q8N1N4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRT78Q8N1N4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRT78Q8N1N4 AC139795.1-202ENST00000500444 432 ntBASIC22.66■■□□□ 1.22
KRT78Q8N1N4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRT78Q8N1N4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.66■■□□□ 1.22
KRT78Q8N1N4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRT78Q8N1N4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRT78Q8N1N4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
KRT78Q8N1N4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
KRT78Q8N1N4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRT78Q8N1N4 AP003733.4-201ENST00000623785 1697 ntBASIC22.65■■□□□ 1.22
KRT78Q8N1N4 AC138932.3-201ENST00000567634 1902 ntBASIC22.65■■□□□ 1.22
KRT78Q8N1N4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.65■■□□□ 1.22
KRT78Q8N1N4 ATP5G2P3-201ENST00000429083 425 ntBASIC22.65■■□□□ 1.22
KRT78Q8N1N4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.65■■□□□ 1.22
KRT78Q8N1N4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KRT78Q8N1N4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.65■■□□□ 1.22
KRT78Q8N1N4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.65■■□□□ 1.22
KRT78Q8N1N4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
KRT78Q8N1N4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KRT78Q8N1N4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
KRT78Q8N1N4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.64■■□□□ 1.21
KRT78Q8N1N4 AC004987.1-201ENST00000428627 508 ntBASIC22.64■■□□□ 1.21
KRT78Q8N1N4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KRT78Q8N1N4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KRT78Q8N1N4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT78Q8N1N4 TSPY13P-201ENST00000338964 914 ntBASIC22.63■■□□□ 1.21
KRT78Q8N1N4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT78Q8N1N4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
KRT78Q8N1N4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
KRT78Q8N1N4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT78Q8N1N4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT78Q8N1N4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT78Q8N1N4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT78Q8N1N4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KRT78Q8N1N4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
KRT78Q8N1N4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KRT78Q8N1N4 AC012354.3-201ENST00000623734 483 ntBASIC22.62■■□□□ 1.21
KRT78Q8N1N4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KRT78Q8N1N4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms