Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC36.48■■■■□ 3.43
CDC42BPAQ5VT25 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
CDC42BPAQ5VT25 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC36.48■■■■□ 3.43
CDC42BPAQ5VT25 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC36.48■■■■□ 3.43
CDC42BPAQ5VT25 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC36.47■■■■□ 3.43
CDC42BPAQ5VT25 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC36.47■■■■□ 3.43
CDC42BPAQ5VT25 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
CDC42BPAQ5VT25 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
CDC42BPAQ5VT25 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
CDC42BPAQ5VT25 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC36.46■■■■□ 3.43
CDC42BPAQ5VT25 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
CDC42BPAQ5VT25 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC36.46■■■■□ 3.43
CDC42BPAQ5VT25 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC36.45■■■■□ 3.43
CDC42BPAQ5VT25 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
CDC42BPAQ5VT25 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
CDC42BPAQ5VT25 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC36.45■■■■□ 3.43
CDC42BPAQ5VT25 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
CDC42BPAQ5VT25 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
CDC42BPAQ5VT25 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
CDC42BPAQ5VT25 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC36.43■■■■□ 3.42
CDC42BPAQ5VT25 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
CDC42BPAQ5VT25 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
CDC42BPAQ5VT25 TK2-202ENST00000417693 1046 ntTSL 2 BASIC36.43■■■■□ 3.42
CDC42BPAQ5VT25 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC36.43■■■■□ 3.42
CDC42BPAQ5VT25 SNX5-217ENST00000606557 1087 ntBASIC36.42■■■■□ 3.42
CDC42BPAQ5VT25 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
CDC42BPAQ5VT25 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
CDC42BPAQ5VT25 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
CDC42BPAQ5VT25 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC36.42■■■■□ 3.42
CDC42BPAQ5VT25 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
CDC42BPAQ5VT25 CD72-202ENST00000378430 585 ntTSL 3 BASIC36.41■■■■□ 3.42
CDC42BPAQ5VT25 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC36.41■■■■□ 3.42
CDC42BPAQ5VT25 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
CDC42BPAQ5VT25 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC36.4■■■■□ 3.42
CDC42BPAQ5VT25 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC36.4■■■■□ 3.42
CDC42BPAQ5VT25 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC36.4■■■■□ 3.42
CDC42BPAQ5VT25 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC36.4■■■■□ 3.42
CDC42BPAQ5VT25 AC142086.6-201ENST00000621154 1765 ntBASIC36.39■■■■□ 3.42
CDC42BPAQ5VT25 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC36.39■■■■□ 3.42
CDC42BPAQ5VT25 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC36.38■■■■□ 3.41
CDC42BPAQ5VT25 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC36.37■■■■□ 3.41
CDC42BPAQ5VT25 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC36.37■■■■□ 3.41
CDC42BPAQ5VT25 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CDC42BPAQ5VT25 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CDC42BPAQ5VT25 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC36.37■■■■□ 3.41
CDC42BPAQ5VT25 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC36.36■■■■□ 3.41
CDC42BPAQ5VT25 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC36.36■■■■□ 3.41
CDC42BPAQ5VT25 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC36.36■■■■□ 3.41
CDC42BPAQ5VT25 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
CDC42BPAQ5VT25 AC096631.2-201ENST00000436136 790 ntBASIC36.36■■■■□ 3.41
CDC42BPAQ5VT25 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC36.35■■■■□ 3.41
CDC42BPAQ5VT25 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC36.35■■■■□ 3.41
CDC42BPAQ5VT25 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC36.34■■■■□ 3.41
CDC42BPAQ5VT25 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
CDC42BPAQ5VT25 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
CDC42BPAQ5VT25 TFPT-201ENST00000391757 774 ntTSL 5 BASIC36.34■■■■□ 3.41
CDC42BPAQ5VT25 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC36.34■■■■□ 3.41
CDC42BPAQ5VT25 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC36.34■■■■□ 3.41
CDC42BPAQ5VT25 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC36.34■■■■□ 3.41
CDC42BPAQ5VT25 CLTA-210ENST00000540080 989 ntTSL 2 BASIC36.34■■■■□ 3.41
CDC42BPAQ5VT25 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC36.34■■■■□ 3.41
CDC42BPAQ5VT25 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
CDC42BPAQ5VT25 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC36.33■■■■□ 3.41
CDC42BPAQ5VT25 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC36.32■■■■□ 3.41
CDC42BPAQ5VT25 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.41
CDC42BPAQ5VT25 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC36.32■■■■□ 3.4
CDC42BPAQ5VT25 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC36.32■■■■□ 3.4
CDC42BPAQ5VT25 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
CDC42BPAQ5VT25 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC36.32■■■■□ 3.4
CDC42BPAQ5VT25 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
CDC42BPAQ5VT25 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC36.31■■■■□ 3.4
CDC42BPAQ5VT25 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
CDC42BPAQ5VT25 AK3-203ENST00000447596 705 ntTSL 2 BASIC36.31■■■■□ 3.4
CDC42BPAQ5VT25 SSSCA1-AS1-201ENST00000567594 614 ntBASIC36.31■■■■□ 3.4
CDC42BPAQ5VT25 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
CDC42BPAQ5VT25 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC36.3■■■■□ 3.4
CDC42BPAQ5VT25 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC36.29■■■■□ 3.4
CDC42BPAQ5VT25 CLTA-206ENST00000466396 695 ntTSL 2 BASIC36.28■■■■□ 3.4
CDC42BPAQ5VT25 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC36.28■■■■□ 3.4
CDC42BPAQ5VT25 AL356740.2-201ENST00000601559 647 ntBASIC36.28■■■■□ 3.4
CDC42BPAQ5VT25 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC36.28■■■■□ 3.4
CDC42BPAQ5VT25 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC36.28■■■■□ 3.4
CDC42BPAQ5VT25 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC36.28■■■■□ 3.4
CDC42BPAQ5VT25 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
CDC42BPAQ5VT25 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC36.28■■■■□ 3.4
CDC42BPAQ5VT25 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC36.27■■■■□ 3.4
CDC42BPAQ5VT25 FOXO3B-201ENST00000395675 1928 ntBASIC36.27■■■■□ 3.4
CDC42BPAQ5VT25 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
CDC42BPAQ5VT25 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC36.26■■■■□ 3.4
CDC42BPAQ5VT25 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
CDC42BPAQ5VT25 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC36.26■■■■□ 3.4
CDC42BPAQ5VT25 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC36.26■■■■□ 3.4
CDC42BPAQ5VT25 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
CDC42BPAQ5VT25 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC36.25■■■■□ 3.39
CDC42BPAQ5VT25 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC36.25■■■■□ 3.39
CDC42BPAQ5VT25 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
CDC42BPAQ5VT25 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
CDC42BPAQ5VT25 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC36.24■■■■□ 3.39
CDC42BPAQ5VT25 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC36.23■■■■□ 3.39
CDC42BPAQ5VT25 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms