Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
WNT3AP56704 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.89■■□□□ 1.41
WNT3AP56704 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
WNT3AP56704 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
WNT3AP56704 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.89■■□□□ 1.41
WNT3AP56704 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
WNT3AP56704 FOXO3B-201ENST00000395675 1928 ntBASIC23.88■■□□□ 1.41
WNT3AP56704 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
WNT3AP56704 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
WNT3AP56704 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
WNT3AP56704 AC004987.1-201ENST00000428627 508 ntBASIC23.88■■□□□ 1.41
WNT3AP56704 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
WNT3AP56704 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
WNT3AP56704 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
WNT3AP56704 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.88■■□□□ 1.41
WNT3AP56704 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
WNT3AP56704 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
WNT3AP56704 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.87■■□□□ 1.41
WNT3AP56704 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
WNT3AP56704 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.87■■□□□ 1.41
WNT3AP56704 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
WNT3AP56704 ATP5G2P3-201ENST00000429083 425 ntBASIC23.87■■□□□ 1.41
WNT3AP56704 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.87■■□□□ 1.41
WNT3AP56704 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.87■■□□□ 1.41
WNT3AP56704 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.87■■□□□ 1.41
WNT3AP56704 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
WNT3AP56704 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
WNT3AP56704 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
WNT3AP56704 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
WNT3AP56704 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
WNT3AP56704 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
WNT3AP56704 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
WNT3AP56704 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
WNT3AP56704 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
WNT3AP56704 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.84■■□□□ 1.41
WNT3AP56704 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.84■■□□□ 1.41
WNT3AP56704 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
WNT3AP56704 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
WNT3AP56704 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.84■■□□□ 1.41
WNT3AP56704 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.84■■□□□ 1.41
WNT3AP56704 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
WNT3AP56704 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.83■■□□□ 1.41
WNT3AP56704 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
WNT3AP56704 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
WNT3AP56704 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
WNT3AP56704 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.82■■□□□ 1.4
WNT3AP56704 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
WNT3AP56704 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.82■■□□□ 1.4
WNT3AP56704 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.82■■□□□ 1.4
WNT3AP56704 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
WNT3AP56704 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
WNT3AP56704 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
WNT3AP56704 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
WNT3AP56704 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
WNT3AP56704 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
WNT3AP56704 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
WNT3AP56704 TSPY13P-201ENST00000338964 914 ntBASIC23.81■■□□□ 1.4
WNT3AP56704 LONRF2P2-201ENST00000439212 571 ntBASIC23.81■■□□□ 1.4
WNT3AP56704 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
WNT3AP56704 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
WNT3AP56704 AC012354.3-201ENST00000623734 483 ntBASIC23.81■■□□□ 1.4
WNT3AP56704 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
WNT3AP56704 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
WNT3AP56704 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
WNT3AP56704 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
WNT3AP56704 AP003733.4-201ENST00000623785 1697 ntBASIC23.8■■□□□ 1.4
WNT3AP56704 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
WNT3AP56704 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
WNT3AP56704 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
WNT3AP56704 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
WNT3AP56704 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
WNT3AP56704 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
WNT3AP56704 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.79■■□□□ 1.4
WNT3AP56704 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
WNT3AP56704 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
WNT3AP56704 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
WNT3AP56704 AC139795.1-202ENST00000500444 432 ntBASIC23.79■■□□□ 1.4
WNT3AP56704 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.79■■□□□ 1.4
WNT3AP56704 MIR6089-201ENST00000616698 64 ntBASIC23.79■■□□□ 1.4
WNT3AP56704 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
WNT3AP56704 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
WNT3AP56704 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
WNT3AP56704 AC135731.1-201ENST00000569415 2548 ntBASIC23.79■■□□□ 1.4
WNT3AP56704 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
WNT3AP56704 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.78■■□□□ 1.4
WNT3AP56704 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
WNT3AP56704 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.78■■□□□ 1.4
WNT3AP56704 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
WNT3AP56704 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
WNT3AP56704 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
WNT3AP56704 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
WNT3AP56704 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.77■■□□□ 1.4
WNT3AP56704 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
WNT3AP56704 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.77■■□□□ 1.4
WNT3AP56704 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
WNT3AP56704 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
WNT3AP56704 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.77■■□□□ 1.4
WNT3AP56704 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
WNT3AP56704 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
WNT3AP56704 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms