Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
PDE1AP54750 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
PDE1AP54750 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
PDE1AP54750 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.94■■■□□ 2.22
PDE1AP54750 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
PDE1AP54750 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.94■■■□□ 2.22
PDE1AP54750 AL139125.2-201ENST00000623134 1869 ntBASIC28.93■■■□□ 2.22
PDE1AP54750 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
PDE1AP54750 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
PDE1AP54750 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
PDE1AP54750 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
PDE1AP54750 AP003733.4-201ENST00000623785 1697 ntBASIC28.92■■■□□ 2.22
PDE1AP54750 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
PDE1AP54750 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.92■■■□□ 2.22
PDE1AP54750 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.91■■■□□ 2.22
PDE1AP54750 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PDE1AP54750 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PDE1AP54750 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.91■■■□□ 2.22
PDE1AP54750 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
PDE1AP54750 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
PDE1AP54750 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
PDE1AP54750 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
PDE1AP54750 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.9■■■□□ 2.22
PDE1AP54750 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC28.9■■■□□ 2.22
PDE1AP54750 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
PDE1AP54750 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
PDE1AP54750 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC28.89■■■□□ 2.22
PDE1AP54750 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
PDE1AP54750 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.89■■■□□ 2.22
PDE1AP54750 MIR6089-201ENST00000616698 64 ntBASIC28.89■■■□□ 2.22
PDE1AP54750 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.89■■■□□ 2.22
PDE1AP54750 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
PDE1AP54750 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
PDE1AP54750 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
PDE1AP54750 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
PDE1AP54750 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
PDE1AP54750 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
PDE1AP54750 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
PDE1AP54750 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC28.88■■■□□ 2.21
PDE1AP54750 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PDE1AP54750 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.87■■■□□ 2.21
PDE1AP54750 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
PDE1AP54750 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.87■■■□□ 2.21
PDE1AP54750 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.87■■■□□ 2.21
PDE1AP54750 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PDE1AP54750 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
PDE1AP54750 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC28.87■■■□□ 2.21
PDE1AP54750 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC28.87■■■□□ 2.21
PDE1AP54750 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.87■■■□□ 2.21
PDE1AP54750 PREB-202ENST00000406567 1910 ntTSL 5 BASIC28.86■■■□□ 2.21
PDE1AP54750 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PDE1AP54750 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PDE1AP54750 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.86■■■□□ 2.21
PDE1AP54750 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC28.85■■■□□ 2.21
PDE1AP54750 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PDE1AP54750 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PDE1AP54750 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PDE1AP54750 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.85■■■□□ 2.21
PDE1AP54750 DUX4L18-201ENST00000553347 1267 ntBASIC28.85■■■□□ 2.21
PDE1AP54750 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.85■■■□□ 2.21
PDE1AP54750 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PDE1AP54750 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
PDE1AP54750 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PDE1AP54750 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.84■■■□□ 2.21
PDE1AP54750 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
PDE1AP54750 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
PDE1AP54750 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PDE1AP54750 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PDE1AP54750 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PDE1AP54750 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PDE1AP54750 AC093323.1-202ENST00000635031 2045 ntBASIC28.83■■■□□ 2.21
PDE1AP54750 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
PDE1AP54750 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.83■■■□□ 2.21
PDE1AP54750 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PDE1AP54750 EED-207ENST00000528180 1745 ntTSL 5 BASIC28.83■■■□□ 2.21
PDE1AP54750 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.82■■■□□ 2.2
PDE1AP54750 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PDE1AP54750 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PDE1AP54750 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PDE1AP54750 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PDE1AP54750 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
PDE1AP54750 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
PDE1AP54750 AC004987.1-201ENST00000428627 508 ntBASIC28.82■■■□□ 2.2
PDE1AP54750 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.82■■■□□ 2.2
PDE1AP54750 LONRF2P2-201ENST00000439212 571 ntBASIC28.82■■■□□ 2.2
PDE1AP54750 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC28.82■■■□□ 2.2
PDE1AP54750 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PDE1AP54750 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PDE1AP54750 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
PDE1AP54750 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PDE1AP54750 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PDE1AP54750 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PDE1AP54750 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PDE1AP54750 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC28.81■■■□□ 2.2
PDE1AP54750 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC28.8■■■□□ 2.2
PDE1AP54750 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.8■■■□□ 2.2
PDE1AP54750 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.8■■■□□ 2.2
PDE1AP54750 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PDE1AP54750 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PDE1AP54750 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms