Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.7■□□□□ 0.74
ACANP16112 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ACANP16112 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ACANP16112 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ACANP16112 BX255925.1-201ENST00000566954 1854 ntBASIC19.7■□□□□ 0.74
ACANP16112 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACANP16112 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.7■□□□□ 0.74
ACANP16112 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ACANP16112 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.7■□□□□ 0.74
ACANP16112 IKBKGP1-201ENST00000612193 1073 ntBASIC19.69■□□□□ 0.74
ACANP16112 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ACANP16112 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.68■□□□□ 0.74
ACANP16112 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ACANP16112 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACANP16112 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACANP16112 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
ACANP16112 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACANP16112 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.68■□□□□ 0.74
ACANP16112 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ACANP16112 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.68■□□□□ 0.74
ACANP16112 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.68■□□□□ 0.74
ACANP16112 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ACANP16112 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ACANP16112 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ACANP16112 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.67■□□□□ 0.74
ACANP16112 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.67■□□□□ 0.74
ACANP16112 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.67■□□□□ 0.74
ACANP16112 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.67■□□□□ 0.74
ACANP16112 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ACANP16112 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.67■□□□□ 0.74
ACANP16112 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACANP16112 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACANP16112 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ACANP16112 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.66■□□□□ 0.74
ACANP16112 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.66■□□□□ 0.74
ACANP16112 AC091305.1-201ENST00000479476 895 ntBASIC19.66■□□□□ 0.74
ACANP16112 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.66■□□□□ 0.74
ACANP16112 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ACANP16112 AL449106.1-201ENST00000608517 1980 ntBASIC19.66■□□□□ 0.74
ACANP16112 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
ACANP16112 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.66■□□□□ 0.74
ACANP16112 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.66■□□□□ 0.74
ACANP16112 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.65■□□□□ 0.74
ACANP16112 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ACANP16112 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.65■□□□□ 0.74
ACANP16112 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ACANP16112 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ACANP16112 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.64■□□□□ 0.74
ACANP16112 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ACANP16112 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ACANP16112 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.64■□□□□ 0.73
ACANP16112 AC022517.1-201ENST00000592429 346 ntBASIC19.64■□□□□ 0.73
ACANP16112 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ACANP16112 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ACANP16112 ID1-201ENST00000376105 1233 ntBASIC19.63■□□□□ 0.73
ACANP16112 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
ACANP16112 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.63■□□□□ 0.73
ACANP16112 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ACANP16112 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.63■□□□□ 0.73
ACANP16112 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
ACANP16112 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACANP16112 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACANP16112 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.62■□□□□ 0.73
ACANP16112 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.62■□□□□ 0.73
ACANP16112 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.62■□□□□ 0.73
ACANP16112 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ACANP16112 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ACANP16112 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ACANP16112 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.61■□□□□ 0.73
ACANP16112 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ACANP16112 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACANP16112 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ACANP16112 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ACANP16112 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.61■□□□□ 0.73
ACANP16112 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.61■□□□□ 0.73
ACANP16112 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.61■□□□□ 0.73
ACANP16112 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACANP16112 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACANP16112 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.6■□□□□ 0.73
ACANP16112 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.6■□□□□ 0.73
ACANP16112 SNX5-217ENST00000606557 1087 ntBASIC19.6■□□□□ 0.73
ACANP16112 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ACANP16112 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACANP16112 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACANP16112 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.6■□□□□ 0.73
ACANP16112 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.6■□□□□ 0.73
ACANP16112 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ACANP16112 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACANP16112 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACANP16112 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ACANP16112 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
ACANP16112 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACANP16112 AC092437.1-201ENST00000624794 1048 ntBASIC19.59■□□□□ 0.73
ACANP16112 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ACANP16112 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACANP16112 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.59■□□□□ 0.73
ACANP16112 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.59■□□□□ 0.73
ACANP16112 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.58■□□□□ 0.73
ACANP16112 ESRRAP2-201ENST00000418437 1549 ntBASIC19.58■□□□□ 0.73
ACANP16112 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms