Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC10.79□□□□□ -0.68
USH2AO75445 SP2-202ENST00000613139 908 ntTSL 5 BASIC10.79□□□□□ -0.68
USH2AO75445 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC10.79□□□□□ -0.68
USH2AO75445 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
USH2AO75445 JTB-203ENST00000368589 1216 ntTSL 2 BASIC10.79□□□□□ -0.68
USH2AO75445 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
USH2AO75445 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
USH2AO75445 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
USH2AO75445 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
USH2AO75445 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC10.78□□□□□ -0.68
USH2AO75445 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
USH2AO75445 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC10.78□□□□□ -0.68
USH2AO75445 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
USH2AO75445 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
USH2AO75445 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC10.78□□□□□ -0.68
USH2AO75445 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC10.78□□□□□ -0.68
USH2AO75445 SRD5A1P1-201ENST00000442297 786 ntBASIC10.78□□□□□ -0.68
USH2AO75445 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
USH2AO75445 AP004833.2-201ENST00000532228 1454 ntBASIC10.78□□□□□ -0.68
USH2AO75445 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
USH2AO75445 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
USH2AO75445 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
USH2AO75445 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
USH2AO75445 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
USH2AO75445 AC004911.1-201ENST00000416316 871 ntBASIC10.78□□□□□ -0.68
USH2AO75445 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
USH2AO75445 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
USH2AO75445 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC10.77□□□□□ -0.68
USH2AO75445 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC10.77□□□□□ -0.68
USH2AO75445 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
USH2AO75445 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
USH2AO75445 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
USH2AO75445 ABCB10P3-201ENST00000561950 2166 ntBASIC10.77□□□□□ -0.69
USH2AO75445 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC10.77□□□□□ -0.69
USH2AO75445 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC10.76□□□□□ -0.69
USH2AO75445 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
USH2AO75445 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
USH2AO75445 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
USH2AO75445 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC10.76□□□□□ -0.69
USH2AO75445 CLTA-210ENST00000540080 989 ntTSL 2 BASIC10.76□□□□□ -0.69
USH2AO75445 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
USH2AO75445 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
USH2AO75445 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC10.76□□□□□ -0.69
USH2AO75445 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
USH2AO75445 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
USH2AO75445 RAP2CP1-201ENST00000605103 478 ntBASIC10.76□□□□□ -0.69
USH2AO75445 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC10.75□□□□□ -0.69
USH2AO75445 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
USH2AO75445 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
USH2AO75445 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
USH2AO75445 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC10.75□□□□□ -0.69
USH2AO75445 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
USH2AO75445 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
USH2AO75445 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC10.75□□□□□ -0.69
USH2AO75445 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC10.75□□□□□ -0.69
USH2AO75445 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC10.75□□□□□ -0.69
USH2AO75445 EMC9-206ENST00000560403 872 ntTSL 2 BASIC10.75□□□□□ -0.69
USH2AO75445 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
USH2AO75445 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC10.75□□□□□ -0.69
USH2AO75445 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
USH2AO75445 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
USH2AO75445 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
USH2AO75445 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
USH2AO75445 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC10.74□□□□□ -0.69
USH2AO75445 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
USH2AO75445 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
USH2AO75445 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC10.74□□□□□ -0.69
USH2AO75445 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
USH2AO75445 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
USH2AO75445 SERBP1P1-201ENST00000396021 1160 ntBASIC10.74□□□□□ -0.69
USH2AO75445 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC10.74□□□□□ -0.69
USH2AO75445 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC10.74□□□□□ -0.69
USH2AO75445 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC10.74□□□□□ -0.69
USH2AO75445 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC10.74□□□□□ -0.69
USH2AO75445 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
USH2AO75445 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
USH2AO75445 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
USH2AO75445 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC10.73□□□□□ -0.69
USH2AO75445 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
USH2AO75445 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
USH2AO75445 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC10.73□□□□□ -0.69
USH2AO75445 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC10.73□□□□□ -0.69
USH2AO75445 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
USH2AO75445 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC10.73□□□□□ -0.69
USH2AO75445 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC10.73□□□□□ -0.69
USH2AO75445 AC027682.1-201ENST00000562846 899 ntBASIC10.73□□□□□ -0.69
USH2AO75445 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
USH2AO75445 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
USH2AO75445 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
USH2AO75445 AP002414.2-202ENST00000590929 1450 ntBASIC10.73□□□□□ -0.69
USH2AO75445 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
USH2AO75445 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
USH2AO75445 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC10.73□□□□□ -0.69
USH2AO75445 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
USH2AO75445 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
USH2AO75445 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
USH2AO75445 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC10.72□□□□□ -0.69
USH2AO75445 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
USH2AO75445 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC10.72□□□□□ -0.69
USH2AO75445 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms