Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.36■■□□□ 1.65
TRANK1O15050 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.36■■□□□ 1.65
TRANK1O15050 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.36■■□□□ 1.65
TRANK1O15050 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRANK1O15050 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRANK1O15050 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRANK1O15050 AC105265.2-201ENST00000467189 838 ntBASIC25.35■■□□□ 1.65
TRANK1O15050 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.35■■□□□ 1.65
TRANK1O15050 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRANK1O15050 AL162430.1-201ENST00000480705 870 ntBASIC25.34■■□□□ 1.65
TRANK1O15050 AL136967.2-201ENST00000623968 743 ntBASIC25.34■■□□□ 1.65
TRANK1O15050 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
TRANK1O15050 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRANK1O15050 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TRANK1O15050 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRANK1O15050 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRANK1O15050 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.33■■□□□ 1.65
TRANK1O15050 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
TRANK1O15050 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRANK1O15050 AC090192.1-201ENST00000517740 490 ntBASIC25.32■■□□□ 1.64
TRANK1O15050 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRANK1O15050 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
TRANK1O15050 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRANK1O15050 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.32■■□□□ 1.64
TRANK1O15050 LINC01003-201ENST00000564834 1764 ntBASIC25.31■■□□□ 1.64
TRANK1O15050 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRANK1O15050 MIR939-201ENST00000401314 82 ntBASIC25.31■■□□□ 1.64
TRANK1O15050 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TRANK1O15050 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRANK1O15050 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRANK1O15050 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.31■■□□□ 1.64
TRANK1O15050 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.31■■□□□ 1.64
TRANK1O15050 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRANK1O15050 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRANK1O15050 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRANK1O15050 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.3■■□□□ 1.64
TRANK1O15050 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRANK1O15050 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRANK1O15050 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.3■■□□□ 1.64
TRANK1O15050 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRANK1O15050 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.29■■□□□ 1.64
TRANK1O15050 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.29■■□□□ 1.64
TRANK1O15050 AC139426.1-201ENST00000568218 2529 ntBASIC25.29■■□□□ 1.64
TRANK1O15050 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
TRANK1O15050 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TRANK1O15050 AP001330.3-201ENST00000520123 633 ntBASIC25.29■■□□□ 1.64
TRANK1O15050 SNX5-217ENST00000606557 1087 ntBASIC25.29■■□□□ 1.64
TRANK1O15050 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.29■■□□□ 1.64
TRANK1O15050 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRANK1O15050 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.28■■□□□ 1.64
TRANK1O15050 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TRANK1O15050 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.28■■□□□ 1.64
TRANK1O15050 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRANK1O15050 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRANK1O15050 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.27■■□□□ 1.64
TRANK1O15050 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRANK1O15050 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRANK1O15050 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TRANK1O15050 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.27■■□□□ 1.64
TRANK1O15050 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TRANK1O15050 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRANK1O15050 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.26■■□□□ 1.63
TRANK1O15050 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRANK1O15050 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRANK1O15050 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.26■■□□□ 1.63
TRANK1O15050 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TRANK1O15050 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRANK1O15050 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRANK1O15050 AL136162.1-201ENST00000607711 1078 ntBASIC25.25■■□□□ 1.63
TRANK1O15050 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRANK1O15050 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.25■■□□□ 1.63
TRANK1O15050 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.25■■□□□ 1.63
TRANK1O15050 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.24■■□□□ 1.63
TRANK1O15050 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.24■■□□□ 1.63
TRANK1O15050 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRANK1O15050 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
TRANK1O15050 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRANK1O15050 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRANK1O15050 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TRANK1O15050 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.22■■□□□ 1.63
TRANK1O15050 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.22■■□□□ 1.63
TRANK1O15050 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.22■■□□□ 1.63
TRANK1O15050 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TRANK1O15050 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.22■■□□□ 1.63
TRANK1O15050 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.22■■□□□ 1.63
TRANK1O15050 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.21■■□□□ 1.63
TRANK1O15050 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.21■■□□□ 1.63
TRANK1O15050 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.21■■□□□ 1.63
TRANK1O15050 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
TRANK1O15050 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TRANK1O15050 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TRANK1O15050 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRANK1O15050 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.2■■□□□ 1.63
TRANK1O15050 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
TRANK1O15050 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
TRANK1O15050 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.2■■□□□ 1.62
TRANK1O15050 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRANK1O15050 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRANK1O15050 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRANK1O15050 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms