Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 PBX2-202ENST00000478678 1320 ntTSL 1 (best)20.91■□□□□ 0.943e-6■□□□□ 8.8
CSTF2TQ9H0L4 CYHR1-212ENST00000533764 853 ntTSL 220.45■□□□□ 0.863e-6■□□□□ 8.8
CSTF2TQ9H0L4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.99■□□□□ 0.793e-6■□□□□ 8.8
CSTF2TQ9H0L4 P4HB-216ENST00000571617 505 ntTSL 319.69■□□□□ 0.743e-6■□□□□ 8.8
CSTF2TQ9H0L4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.37■□□□□ 0.533e-6■□□□□ 8.8
CSTF2TQ9H0L4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.53e-6■□□□□ 8.8
CSTF2TQ9H0L4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.473e-6■□□□□ 8.8
CSTF2TQ9H0L4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.89■□□□□ 0.453e-6■□□□□ 8.8
CSTF2TQ9H0L4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.67■□□□□ 0.423e-6■□□□□ 8.8
CSTF2TQ9H0L4 AC005332.8-201ENST00000622750 2735 ntBASIC17.52■□□□□ 0.393e-6■□□□□ 8.8
CSTF2TQ9H0L4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.343e-6■□□□□ 8.8
CSTF2TQ9H0L4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.02■□□□□ 0.323e-6■□□□□ 8.8
CSTF2TQ9H0L4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.163e-6■□□□□ 8.8
CSTF2TQ9H0L4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.113e-6■□□□□ 8.8
CSTF2TQ9H0L4 ABHD14B-207ENST00000487005 1998 ntTSL 215.44■□□□□ 0.063e-6■□□□□ 8.8
CSTF2TQ9H0L4 P4HB-202ENST00000415593 1669 ntTSL 1 (best)15.33■□□□□ 0.043e-6■□□□□ 8.8
CSTF2TQ9H0L4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.33■□□□□ 0.046e-7■□□□□ 8.8
CSTF2TQ9H0L4 P4HB-208ENST00000473021 914 ntTSL 1 (best)14.54□□□□□ -0.083e-6■□□□□ 8.8
CSTF2TQ9H0L4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.29□□□□□ -0.123e-6■□□□□ 8.8
CSTF2TQ9H0L4 DGKD-203ENST00000427930 482 ntTSL 514.26□□□□□ -0.133e-6■□□□□ 8.8
CSTF2TQ9H0L4 P4HB-220ENST00000575069 2453 ntTSL 213.39□□□□□ -0.273e-6■□□□□ 8.8
CSTF2TQ9H0L4 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.343e-6■□□□□ 8.8
CSTF2TQ9H0L4 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.353e-6■□□□□ 8.8
CSTF2TQ9H0L4 GREB1-207ENST00000432985 2052 ntTSL 1 (best)11.67□□□□□ -0.541e-8■□□□□ 8.8
CSTF2TQ9H0L4 P4HB-210ENST00000476482 765 ntTSL 1 (best)11.63□□□□□ -0.553e-6■□□□□ 8.8
CSTF2TQ9H0L4 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.571e-8■□□□□ 8.8
CSTF2TQ9H0L4 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.61e-8■□□□□ 8.8
CSTF2TQ9H0L4 SMAD3-204ENST00000540846 1567 ntTSL 1 (best) BASIC11.19□□□□□ -0.623e-6■□□□□ 8.8
CSTF2TQ9H0L4 UBE2N-203ENST00000549490 676 ntTSL 28.56□□□□□ -1.043e-6■□□□□ 8.8
CSTF2TQ9H0L4 UBE2N-206ENST00000552442 607 ntTSL 5 BASIC8.48□□□□□ -1.053e-6■□□□□ 8.8
CSTF2TQ9H0L4 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC8.34□□□□□ -1.073e-6■□□□□ 8.8
CSTF2TQ9H0L4 DGKD-206ENST00000447484 494 ntTSL 36.09□□□□□ -1.433e-6■□□□□ 8.8
CSTF2TQ9H0L4 P4HB-215ENST00000571507 493 ntTSL 25.2□□□□□ -1.583e-6■□□□□ 8.8
CSTF2TQ9H0L4 SMAD3-209ENST00000558894 797 ntTSL 55.19□□□□□ -1.583e-6■□□□□ 8.8
CSTF2TQ9H0L4 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.76□□□□□ -1.339e-7■□□□□ 8.8
CSTF2TQ9H0L4 PLEKHA1-206ENST00000463663 617 ntTSL 523.04■■□□□ 1.288e-8■□□□□ 8.8
CSTF2TQ9H0L4 GSK3A-203ENST00000453535 1897 ntTSL 525.22■■□□□ 1.636e-7■□□□□ 8.8
CSTF2TQ9H0L4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.046e-7■□□□□ 8.8
CSTF2TQ9H0L4 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.996e-7■□□□□ 8.8
CSTF2TQ9H0L4 MIR210-201ENST00000362168 110 ntBASIC9.62□□□□□ -0.872e-10■□□□□ 8.8
CSTF2TQ9H0L4 MED15-222ENST00000473244 2733 ntTSL 1 (best)18.61■□□□□ 0.572e-6■□□□□ 8.8
CSTF2TQ9H0L4 MED15-231ENST00000493216 4701 ntTSL 216.25■□□□□ 0.192e-6■□□□□ 8.8
CSTF2TQ9H0L4 PLA2G4B-203ENST00000461382 1530 ntTSL 216.64■□□□□ 0.255e-8■□□□□ 8.8
CSTF2TQ9H0L4 CLPX-203ENST00000558958 1493 ntTSL 1 (best)16.47■□□□□ 0.235e-8■□□□□ 8.8
CSTF2TQ9H0L4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.185e-8■□□□□ 8.8
CSTF2TQ9H0L4 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.455e-8■□□□□ 8.8
CSTF2TQ9H0L4 HPN-207ENST00000599363 1828 ntTSL 519.57■□□□□ 0.724e-8■□□□□ 8.7
CSTF2TQ9H0L4 HPN-208ENST00000600390 564 ntTSL 417.94■□□□□ 0.464e-8■□□□□ 8.7
CSTF2TQ9H0L4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.054e-8■□□□□ 8.7
CSTF2TQ9H0L4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.094e-8■□□□□ 8.7
CSTF2TQ9H0L4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.27□□□□□ -0.294e-8■□□□□ 8.7
CSTF2TQ9H0L4 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.08□□□□□ -0.324e-8■□□□□ 8.7
CSTF2TQ9H0L4 LINC01341-204ENST00000505748 595 ntTSL 4 BASIC9.53□□□□□ -0.884e-8■□□□□ 8.7
CSTF2TQ9H0L4 SDF2-202ENST00000585428 924 ntTSL 1 (best)13.73□□□□□ -0.214e-6■□□□□ 8.7
CSTF2TQ9H0L4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.384e-6■□□□□ 8.7
CSTF2TQ9H0L4 SDF2-203ENST00000585749 823 ntTSL 38.64□□□□□ -1.034e-6■□□□□ 8.7
CSTF2TQ9H0L4 SDF2-207ENST00000588472 681 ntTSL 28.34□□□□□ -1.074e-6■□□□□ 8.7
CSTF2TQ9H0L4 SDF2-204ENST00000587338 583 ntTSL 38.2□□□□□ -1.14e-6■□□□□ 8.7
CSTF2TQ9H0L4 SDF2-210ENST00000592250 1025 ntTSL 27□□□□□ -1.294e-6■□□□□ 8.7
CSTF2TQ9H0L4 TLK1-209ENST00000470340 521 ntTSL 48.98□□□□□ -0.973e-9■□□□□ 8.7
CSTF2TQ9H0L4 STX4-204ENST00000460668 842 ntTSL 322.9■■□□□ 1.265e-8■□□□□ 8.7
CSTF2TQ9H0L4 STX4-212ENST00000496977 983 ntTSL 522.9■■□□□ 1.265e-8■□□□□ 8.7
CSTF2TQ9H0L4 STX4-210ENST00000487411 1290 ntTSL 1 (best)21.14■□□□□ 0.975e-8■□□□□ 8.7
CSTF2TQ9H0L4 STX4-215ENST00000565483 846 ntTSL 520.65■□□□□ 0.95e-8■□□□□ 8.7
CSTF2TQ9H0L4 STX4-203ENST00000457779 571 ntTSL 320.35■□□□□ 0.855e-8■□□□□ 8.7
CSTF2TQ9H0L4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.27■□□□□ 0.845e-8■□□□□ 8.7
CSTF2TQ9H0L4 STX4-211ENST00000493902 1588 ntTSL 520.03■□□□□ 0.85e-8■□□□□ 8.7
CSTF2TQ9H0L4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.795e-8■□□□□ 8.7
CSTF2TQ9H0L4 STX4-216ENST00000566353 696 ntTSL 219.98■□□□□ 0.795e-8■□□□□ 8.7
CSTF2TQ9H0L4 STX4-205ENST00000461455 1002 ntTSL 219.03■□□□□ 0.645e-8■□□□□ 8.7
CSTF2TQ9H0L4 STX4-208ENST00000478150 545 ntTSL 416.81■□□□□ 0.285e-8■□□□□ 8.7
CSTF2TQ9H0L4 STX4-217ENST00000613541 649 ntTSL 216.37■□□□□ 0.215e-8■□□□□ 8.7
CSTF2TQ9H0L4 ABL1-202ENST00000372348 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.688e-7■□□□□ 8.7
CSTF2TQ9H0L4 ABL1-203ENST00000393293 532 ntTSL 58.16□□□□□ -1.18e-7■□□□□ 8.7
CSTF2TQ9H0L4 SEMA3B-215ENST00000621029 934 ntTSL 527.34■■□□□ 1.974e-6■□□□□ 8.7
CSTF2TQ9H0L4 SIRT7-208ENST00000572350 713 ntTSL 322.45■■□□□ 1.185e-8■□□□□ 8.7
CSTF2TQ9H0L4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.474e-6■□□□□ 8.7
CSTF2TQ9H0L4 MNX1-208ENST00000605400 1753 nt17.48■□□□□ 0.394e-6■□□□□ 8.7
CSTF2TQ9H0L4 SIRT7-221ENST00000577065 874 ntTSL 317.46■□□□□ 0.395e-8■□□□□ 8.7
CSTF2TQ9H0L4 SEMA3B-211ENST00000612509 1061 ntTSL 516.86■□□□□ 0.294e-6■□□□□ 8.7
CSTF2TQ9H0L4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.235e-8■□□□□ 8.7
CSTF2TQ9H0L4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.134e-6■□□□□ 8.7
CSTF2TQ9H0L4 SEMA3B-214ENST00000619119 3158 ntTSL 515.5■□□□□ 0.074e-6■□□□□ 8.7
CSTF2TQ9H0L4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.034e-6■□□□□ 8.7
CSTF2TQ9H0L4 SEMA3B-207ENST00000441915 2710 ntTSL 1 (best)15.25■□□□□ 0.034e-6■□□□□ 8.7
CSTF2TQ9H0L4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.144e-6■□□□□ 8.7
CSTF2TQ9H0L4 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.34e-6■□□□□ 8.7
CSTF2TQ9H0L4 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC12.14□□□□□ -0.475e-8■□□□□ 8.7
CSTF2TQ9H0L4 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC9.8□□□□□ -0.844e-6■□□□□ 8.7
CSTF2TQ9H0L4 RSBN1L-203ENST00000445288 2667 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.894e-6■□□□□ 8.7
CSTF2TQ9H0L4 RSBN1L-204ENST00000445512 784 ntAPPRIS ALT2 TSL 38.81□□□□□ -14e-6■□□□□ 8.7
CSTF2TQ9H0L4 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.014e-6■□□□□ 8.7
CSTF2TQ9H0L4 AC009120.2-203ENST00000565313 539 ntTSL 3 BASIC8.14□□□□□ -1.115e-8■□□□□ 8.7
CSTF2TQ9H0L4 RSBN1L-206ENST00000468035 585 ntTSL 37.94□□□□□ -1.144e-6■□□□□ 8.7
CSTF2TQ9H0L4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.514e-6■□□□□ 8.7
CSTF2TQ9H0L4 CERK-203ENST00000460254 434 ntTSL 211.2□□□□□ -0.629e-7■□□□□ 8.7
CSTF2TQ9H0L4 DDB1-220ENST00000542337 558 ntTSL 319.14■□□□□ 0.651e-6■□□□□ 8.7
CSTF2TQ9H0L4 ARL6IP4-203ENST00000392433 1370 ntTSL 216.94■□□□□ 0.31e-6■□□□□ 8.7
CSTF2TQ9H0L4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.081e-6■□□□□ 8.7
CSTF2TQ9H0L4 MAPK8IP3-213ENST00000568271 752 ntTSL 513.64□□□□□ -0.231e-6■□□□□ 8.7
Retrieved 100 of 19,151 protein–RNA pairs in 293.9 ms