RNA–Protein interactions for RNA: ENST00000453535.1

GSK3A-203, Transcript of glycogen synthase kinase 3 alpha, humanhuman

TSL 5

Gene GSK3A, Length 1,897 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-203ENST00000453535 NISCHQ9Y2I1 1504 aa63.31■■■■■ 7.73
GSK3A-203ENST00000453535 CCDC180Q9P1Z9 1646 aa55.39■■■■■ 6.46
GSK3A-203ENST00000453535 ZCCHC6Q5VYS8 1495 aaKnown RBP53.1■■■■■ 6.09
GSK3A-203ENST00000453535 ABCC9O60706 1549 aa52.85■■■■■ 6.05
GSK3A-203ENST00000453535 DCAF8L2P0C7V8 631 aa52.45■■■■■ 5.99
GSK3A-203ENST00000453535 DCAF1Q9Y4B6 1507 aa52.29■■■■■ 5.96
GSK3A-203ENST00000453535 MYO15BQ96JP2 1530 aa51.82■■■■■ 5.89
GSK3A-203ENST00000453535 NACADO15069 1562 aa51.67■■■■■ 5.86
GSK3A-203ENST00000453535 SHROOM4Q9ULL8 1493 aa51.4■■■■■ 5.82
GSK3A-203ENST00000453535 RB1CC1Q8TDY2 1594 aa51.35■■■■■ 5.81
GSK3A-203ENST00000453535 SCRIBQ14160 1630 aa50.95■■■■■ 5.75
GSK3A-203ENST00000453535 UNC13AQ9UPW8 1703 aa50.44■■■■■ 5.67
GSK3A-203ENST00000453535 BICRAQ9NZM4 1560 aa49.9■■■■■ 5.58
GSK3A-203ENST00000453535 SUPT5HO00267 1087 aaKnown RBP49.79■■■■■ 5.56
GSK3A-203ENST00000453535 PABPN1Q86U42 306 aaKnown RBP eCLIP49.76■■■■■ 5.56
GSK3A-203ENST00000453535 CECR2Q9BXF3 1484 aa49.29■■■■■ 5.48
GSK3A-203ENST00000453535 RSF1Q96T23 1441 aaPredicted RBP48.95■■■■■ 5.43
GSK3A-203ENST00000453535 MROH2BQ7Z745 1585 aa48.94■■■■■ 5.42
GSK3A-203ENST00000453535 BAZ1AQ9NRL2 1556 aaPredicted RBP48.89■■■■■ 5.42
GSK3A-203ENST00000453535 SMARCA4P51532 1647 aa48.78■■■■■ 5.4
GSK3A-203ENST00000453535 WIZO95785 1651 aa48.54■■■■■ 5.36
GSK3A-203ENST00000453535 EIF4G1Q04637 1599 aaKnown RBP48.4■■■■■ 5.34
GSK3A-203ENST00000453535 PEG3Q9GZU2 1588 aa48.18■■■■■ 5.3
GSK3A-203ENST00000453535 ATAD2BQ9ULI0 1458 aa48.08■■■■■ 5.29
GSK3A-203ENST00000453535 CHIC1Q5VXU3 224 aa48.01■■■■■ 5.28
GSK3A-203ENST00000453535 SMARCA2P51531 1590 aa48■■■■■ 5.27
GSK3A-203ENST00000453535 TOP2AP11388 1531 aaKnown RBP47.95■■■■■ 5.27
GSK3A-203ENST00000453535 CC2D2AQ9P2K1 1620 aa47.82■■■■■ 5.25
GSK3A-203ENST00000453535 BAZ1BQ9UIG0 1483 aaKnown RBP47.76■■■■■ 5.24
GSK3A-203ENST00000453535 NCAPD3P42695 1498 aa47.71■■■■■ 5.23
GSK3A-203ENST00000453535 HMGXB3Q12766 1538 aa47.61■■■■■ 5.21
GSK3A-203ENST00000453535 CCDC88BA6NC98 1476 aa47.48■■■■■ 5.19
GSK3A-203ENST00000453535 DNAJC5BQ9UF47 199 aa47.08■■■■■ 5.13
GSK3A-203ENST00000453535 TRIM41Q8WV44 630 aa46.76■■■■■ 5.08
GSK3A-203ENST00000453535 CFTRP13569 1480 aa46.54■■■■■ 5.04
GSK3A-203ENST00000453535 CADPSQ9ULU8 1353 aa46.46■■■■■ 5.03
GSK3A-203ENST00000453535 ABCC8Q09428 1581 aa46.39■■■■■ 5.02
GSK3A-203ENST00000453535 PRDM2Q13029 1718 aa46.32■■■■■ 5
GSK3A-203ENST00000453535 NESP48681 1621 aa46.3■■■■■ 5
GSK3A-203ENST00000453535 LOC105371045A0A1W2PR82 267 aa46.23■■■■■ 4.99
GSK3A-203ENST00000453535 LAMC3Q9Y6N6 1575 aa46.16■■■■■ 4.98
GSK3A-203ENST00000453535 WRNQ14191 1432 aaPredicted RBP eCLIP46.07■■■■■ 4.97
GSK3A-203ENST00000453535 FANCD2Q9BXW9 1451 aa45.97■■■■■ 4.95
GSK3A-203ENST00000453535 SYNJ1O43426 1573 aa45.96■■■■■ 4.95
GSK3A-203ENST00000453535 FAM9AQ8IZU1 332 aaPredicted RBP45.93■■■■■ 4.94
GSK3A-203ENST00000453535 PDS5BQ9NTI5 1447 aa45.79■■■■■ 4.92
GSK3A-203ENST00000453535 CUX1P39880 1505 aa45.78■■■■■ 4.92
GSK3A-203ENST00000453535 TOP2BQ02880 1626 aa45.76■■■■■ 4.92
GSK3A-203ENST00000453535 KIF21AQ7Z4S6 1674 aa45.74■■■■■ 4.91
GSK3A-203ENST00000453535 BIVM-ERCC5R4GMW8 1640 aa45.73■■■■■ 4.91
GSK3A-203ENST00000453535 CEP164Q9UPV0 1460 aa45.71■■■■■ 4.91
GSK3A-203ENST00000453535 DNMBPQ6XZF7 1577 aa45.46■■■■■ 4.87
GSK3A-203ENST00000453535 URB2Q14146 1524 aaKnown RBP45.46■■■■■ 4.87
GSK3A-203ENST00000453535 EEA1Q15075 1411 aa45.44■■■■■ 4.86
GSK3A-203ENST00000453535 TOPBP1Q92547 1522 aa45.44■■■■■ 4.86
GSK3A-203ENST00000453535 SOGA1O94964 1423 aa45.41■■■■■ 4.86
GSK3A-203ENST00000453535 FGD5Q6ZNL6 1462 aa45.34■■■■■ 4.85
GSK3A-203ENST00000453535 ERCC6Q03468 1493 aa45.3■■■■■ 4.84
GSK3A-203ENST00000453535 RUSC2Q8N2Y8 1516 aa45.3■■■■■ 4.84
GSK3A-203ENST00000453535 EHMT2Q96KQ7 1210 aa45.27■■■■■ 4.84
GSK3A-203ENST00000453535 MRC2Q9UBG0 1479 aa45.26■■■■■ 4.84
GSK3A-203ENST00000453535 CSRNP3Q8WYN3 585 aa45.19■■■■■ 4.83
GSK3A-203ENST00000453535 POLA1P09884 1462 aaPredicted RBP45.19■■■■■ 4.82
GSK3A-203ENST00000453535 THOC2Q8NI27 1593 aaKnown RBP45.07■■■■■ 4.81
GSK3A-203ENST00000453535 RAD54L2Q9Y4B4 1467 aa45.07■■■■■ 4.8
GSK3A-203ENST00000453535 WDR62O43379 1518 aa45.06■■■■■ 4.8
GSK3A-203ENST00000453535 CUX2O14529 1486 aa44.94■■■■■ 4.79
GSK3A-203ENST00000453535 KIF27Q86VH2 1401 aa44.91■■■■■ 4.78
GSK3A-203ENST00000453535 ABCA10Q8WWZ4 1543 aa44.89■■■■■ 4.78
GSK3A-203ENST00000453535 TNIKQ9UKE5 1360 aa44.86■■■■■ 4.77
GSK3A-203ENST00000453535 WDR97A6NE52 1622 aa44.85■■■■■ 4.77
GSK3A-203ENST00000453535 GOLGA3Q08378 1498 aa44.84■■■■■ 4.77
GSK3A-203ENST00000453535 TARBP1Q13395 1621 aaKnown RBP44.81■■■■■ 4.76
GSK3A-203ENST00000453535 PCGF6Q9BYE7 350 aa44.79■■■■■ 4.76
GSK3A-203ENST00000453535 KIF21BO75037 1637 aa44.77■■■■■ 4.76
GSK3A-203ENST00000453535 UBTFP17480 764 aaKnown RBP44.67■■■■■ 4.74
GSK3A-203ENST00000453535 TDRD9Q8NDG6 1382 aaKnown RBP44.65■■■■■ 4.74
GSK3A-203ENST00000453535 CEP162Q5TB80 1403 aa44.65■■■■■ 4.74
GSK3A-203ENST00000453535 TRIM26Q12899 539 aaPredicted RBP44.63■■■■■ 4.73
GSK3A-203ENST00000453535 IFT140Q96RY7 1462 aa44.62■■■■■ 4.73
GSK3A-203ENST00000453535 IGF1RP08069 1367 aa44.6■■■■■ 4.73
GSK3A-203ENST00000453535 ABCA5Q8WWZ7 1642 aa44.6■■■■■ 4.73
GSK3A-203ENST00000453535 PRXQ9BXM0 1461 aa44.53■■■■■ 4.72
GSK3A-203ENST00000453535 GAPVD1Q14C86 1478 aa44.5■■■■■ 4.71
GSK3A-203ENST00000453535 RAPGEF2Q9Y4G8 1499 aa44.49■■■■■ 4.71
GSK3A-203ENST00000453535 ZNF608Q9ULD9 1512 aaPredicted RBP44.49■■■■■ 4.71
GSK3A-203ENST00000453535 AQRO60306 1485 aaKnown RBP eCLIP44.45■■■■■ 4.711e-6■■■□□ 18.3
GSK3A-203ENST00000453535 ERICH3Q5RHP9 1530 aa44.37■■■■■ 4.69
GSK3A-203ENST00000453535 CARMIL1Q5VZK9 1371 aa44.36■■■■■ 4.69
GSK3A-203ENST00000453535 PBRM1Q86U86 1689 aa44.34■■■■■ 4.69
GSK3A-203ENST00000453535 EIF4G3O43432 1585 aaKnown RBP44.31■■■■■ 4.68
GSK3A-203ENST00000453535 CUL7Q14999 1698 aa44.28■■■■■ 4.68
GSK3A-203ENST00000453535 GRIN2BQ13224 1484 aa44.2■■■■■ 4.67
GSK3A-203ENST00000453535 CLIP1P30622 1438 aa44.16■■■■■ 4.66
GSK3A-203ENST00000453535 HRCP23327 699 aa44.04■■■■■ 4.64
GSK3A-203ENST00000453535 ADAMTS12P58397 1594 aa44.04■■■■■ 4.64
GSK3A-203ENST00000453535 SNAPC4Q5SXM2 1469 aa44.01■■■■■ 4.64
GSK3A-203ENST00000453535 PPARGC1BQ86YN6 1023 aaKnown RBP43.99■■■■■ 4.63
GSK3A-203ENST00000453535 FHAD1B1AJZ9 1412 aa43.99■■■■■ 4.63
GSK3A-203ENST00000453535 MAGI1Q96QZ7 1491 aaPredicted RBP43.87■■■■■ 4.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms