RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 NISCHQ9Y2I1 1504 aa35.66■■■■□ 3.3
SEMA3B-213ENST00000618865 CCDC180Q9P1Z9 1646 aa30.45■■■□□ 2.46
SEMA3B-213ENST00000618865 SHROOM4Q9ULL8 1493 aa30.25■■■□□ 2.43
SEMA3B-213ENST00000618865 ZCCHC6Q5VYS8 1495 aaKnown RBP30.13■■■□□ 2.41
SEMA3B-213ENST00000618865 DCAF8L2P0C7V8 631 aa29.57■■■□□ 2.32
SEMA3B-213ENST00000618865 SUPT5HO00267 1087 aaKnown RBP29.51■■■□□ 2.31
SEMA3B-213ENST00000618865 DCAF1Q9Y4B6 1507 aa29.24■■■□□ 2.27
SEMA3B-213ENST00000618865 CHIC1Q5VXU3 224 aa28.59■■■□□ 2.17
SEMA3B-213ENST00000618865 SCRIBQ14160 1630 aa28.52■■■□□ 2.16
SEMA3B-213ENST00000618865 MYO15BQ96JP2 1530 aa28.51■■■□□ 2.16
SEMA3B-213ENST00000618865 ABCC9O60706 1549 aa28.4■■■□□ 2.14
SEMA3B-213ENST00000618865 NACADO15069 1562 aa28.16■■■□□ 2.1
SEMA3B-213ENST00000618865 RSF1Q96T23 1441 aaPredicted RBP28.13■■■□□ 2.09
SEMA3B-213ENST00000618865 CECR2Q9BXF3 1484 aa27.87■■■□□ 2.05
SEMA3B-213ENST00000618865 RB1CC1Q8TDY2 1594 aa27.86■■■□□ 2.05
SEMA3B-213ENST00000618865 LOC105371045A0A1W2PR82 267 aa27.76■■■□□ 2.03
SEMA3B-213ENST00000618865 MROH2BQ7Z745 1585 aa27.75■■■□□ 2.03
SEMA3B-213ENST00000618865 WIZO95785 1651 aa27.62■■■□□ 2.01
SEMA3B-213ENST00000618865 UNC13AQ9UPW8 1703 aa27.48■■□□□ 1.99
SEMA3B-213ENST00000618865 TRIM41Q8WV44 630 aa27.47■■□□□ 1.99
SEMA3B-213ENST00000618865 PCGF6Q9BYE7 350 aa27.44■■□□□ 1.98
SEMA3B-213ENST00000618865 BAZ1AQ9NRL2 1556 aaPredicted RBP27.39■■□□□ 1.97
SEMA3B-213ENST00000618865 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
SEMA3B-213ENST00000618865 HRCP23327 699 aa27.27■■□□□ 1.96
SEMA3B-213ENST00000618865 SMARCA4P51532 1647 aa27.23■■□□□ 1.95
SEMA3B-213ENST00000618865 EIF4G1Q04637 1599 aaKnown RBP27.16■■□□□ 1.94
SEMA3B-213ENST00000618865 TOP2AP11388 1531 aaKnown RBP27.12■■□□□ 1.93
SEMA3B-213ENST00000618865 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.939e-8■■■■□ 19.4
SEMA3B-213ENST00000618865 BICRAQ9NZM4 1560 aa27.1■■□□□ 1.93
SEMA3B-213ENST00000618865 EHMT2Q96KQ7 1210 aa27.08■■□□□ 1.93
SEMA3B-213ENST00000618865 CCDC88BA6NC98 1476 aa27.01■■□□□ 1.91
SEMA3B-213ENST00000618865 SMARCA2P51531 1590 aa27■■□□□ 1.91
SEMA3B-213ENST00000618865 TRIM26Q12899 539 aaPredicted RBP26.94■■□□□ 1.9
SEMA3B-213ENST00000618865 ABCC8Q09428 1581 aa26.91■■□□□ 1.9
SEMA3B-213ENST00000618865 PPARGC1BQ86YN6 1023 aaKnown RBP26.83■■□□□ 1.89
SEMA3B-213ENST00000618865 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
SEMA3B-213ENST00000618865 PELP1Q8IZL8 1130 aaKnown RBP26.6■■□□□ 1.85
SEMA3B-213ENST00000618865 SOGA1O94964 1423 aa26.58■■□□□ 1.84
SEMA3B-213ENST00000618865 ATAD2BQ9ULI0 1458 aa26.56■■□□□ 1.84
SEMA3B-213ENST00000618865 RUSC2Q8N2Y8 1516 aa26.49■■□□□ 1.83
SEMA3B-213ENST00000618865 BAZ1BQ9UIG0 1483 aaKnown RBP26.46■■□□□ 1.83
SEMA3B-213ENST00000618865 WRNQ14191 1432 aaPredicted RBP eCLIP26.4■■□□□ 1.82
SEMA3B-213ENST00000618865 SYNJ1O43426 1573 aa26.36■■□□□ 1.81
SEMA3B-213ENST00000618865 CSRNP3Q8WYN3 585 aa26.33■■□□□ 1.81
SEMA3B-213ENST00000618865 CEP162Q5TB80 1403 aa26.31■■□□□ 1.8
SEMA3B-213ENST00000618865 EEA1Q15075 1411 aa26.3■■□□□ 1.8
SEMA3B-213ENST00000618865 TNIKQ9UKE5 1360 aa26.26■■□□□ 1.79
SEMA3B-213ENST00000618865 UBTFP17480 764 aaKnown RBP26.19■■□□□ 1.78
SEMA3B-213ENST00000618865 MYT1Q01538 1121 aa26.17■■□□□ 1.78
SEMA3B-213ENST00000618865 ZEB1P37275 1124 aaPredicted RBP26.16■■□□□ 1.78
SEMA3B-213ENST00000618865 GOLGA3Q08378 1498 aa26.16■■□□□ 1.78
SEMA3B-213ENST00000618865 TTBK1Q5TCY1 1321 aaPredicted RBP26.14■■□□□ 1.78
SEMA3B-213ENST00000618865 NCAPD3P42695 1498 aa26.06■■□□□ 1.76
SEMA3B-213ENST00000618865 HMGXB3Q12766 1538 aa26.05■■□□□ 1.76
SEMA3B-213ENST00000618865 KIF21BO75037 1637 aa26.04■■□□□ 1.76
SEMA3B-213ENST00000618865 CEP164Q9UPV0 1460 aa26.03■■□□□ 1.76
SEMA3B-213ENST00000618865 TOP2BQ02880 1626 aa26.02■■□□□ 1.76
SEMA3B-213ENST00000618865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.98■■□□□ 1.75
SEMA3B-213ENST00000618865 BIVM-ERCC5R4GMW8 1640 aa25.95■■□□□ 1.75
SEMA3B-213ENST00000618865 RAPGEF2Q9Y4G8 1499 aa25.93■■□□□ 1.74
SEMA3B-213ENST00000618865 CLIP1P30622 1438 aa25.85■■□□□ 1.73
SEMA3B-213ENST00000618865 CUX1P39880 1505 aa25.85■■□□□ 1.73
SEMA3B-213ENST00000618865 CCER1Q8TC90 406 aaPredicted RBP25.83■■□□□ 1.73
SEMA3B-213ENST00000618865 CFTRP13569 1480 aa25.8■■□□□ 1.72
SEMA3B-213ENST00000618865 RANGAP1P46060 587 aaPredicted RBP25.79■■□□□ 1.72
SEMA3B-213ENST00000618865 VPS8Q8N3P4 1428 aa25.71■■□□□ 1.71
SEMA3B-213ENST00000618865 PRXQ9BXM0 1461 aa25.69■■□□□ 1.7
SEMA3B-213ENST00000618865 PRDM2Q13029 1718 aa25.65■■□□□ 1.7
SEMA3B-213ENST00000618865 ERICH3Q5RHP9 1530 aa25.64■■□□□ 1.69
SEMA3B-213ENST00000618865 CC2D2AQ9P2K1 1620 aa25.59■■□□□ 1.69
SEMA3B-213ENST00000618865 KIF27Q86VH2 1401 aa25.58■■□□□ 1.69
SEMA3B-213ENST00000618865 CADPSQ9ULU8 1353 aa25.54■■□□□ 1.68
SEMA3B-213ENST00000618865 ARAP1Q96P48 1450 aa25.52■■□□□ 1.68
SEMA3B-213ENST00000618865 HNRNPUL2Q1KMD3 747 aaKnown RBP25.5■■□□□ 1.67
SEMA3B-213ENST00000618865 APLP2Q06481 763 aa25.49■■□□□ 1.67
SEMA3B-213ENST00000618865 CUX2O14529 1486 aa25.43■■□□□ 1.66
SEMA3B-213ENST00000618865 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
SEMA3B-213ENST00000618865 IGF1RP08069 1367 aa25.37■■□□□ 1.65
SEMA3B-213ENST00000618865 KANK4Q5T7N3 995 aaPredicted RBP25.34■■□□□ 1.65
SEMA3B-213ENST00000618865 ARHGAP35Q9NRY4 1499 aa25.33■■□□□ 1.65
SEMA3B-213ENST00000618865 FANCD2Q9BXW9 1451 aa25.32■■□□□ 1.64
SEMA3B-213ENST00000618865 PRKCSHP14314 528 aaPredicted RBP25.31■■□□□ 1.64
SEMA3B-213ENST00000618865 NESP48681 1621 aa25.28■■□□□ 1.64
SEMA3B-213ENST00000618865 CARMIL1Q5VZK9 1371 aa25.23■■□□□ 1.63
SEMA3B-213ENST00000618865 RAD54L2Q9Y4B4 1467 aa25.19■■□□□ 1.62
SEMA3B-213ENST00000618865 DIEXFQ68CQ4 756 aaKnown RBP25.19■■□□□ 1.62
SEMA3B-213ENST00000618865 DNMBPQ6XZF7 1577 aa25.17■■□□□ 1.62
SEMA3B-213ENST00000618865 TOPBP1Q92547 1522 aa25.15■■□□□ 1.62
SEMA3B-213ENST00000618865 POLA1P09884 1462 aaPredicted RBP25.12■■□□□ 1.61
SEMA3B-213ENST00000618865 RRBP1Q9P2E9 1410 aaKnown RBP25.08■■□□□ 1.61
SEMA3B-213ENST00000618865 ABCA10Q8WWZ4 1543 aa25.07■■□□□ 1.6
SEMA3B-213ENST00000618865 ZNF316A6NFI3 1004 aaPredicted RBP25.07■■□□□ 1.6
SEMA3B-213ENST00000618865 DNAJC5BQ9UF47 199 aa25.07■■□□□ 1.6
SEMA3B-213ENST00000618865 TIAM1Q13009 1591 aa25.01■■□□□ 1.59
SEMA3B-213ENST00000618865 URB2Q14146 1524 aaKnown RBP25.01■■□□□ 1.59
SEMA3B-213ENST00000618865 SCAF1Q9H7N4 1312 aaKnown RBP25■■□□□ 1.59
SEMA3B-213ENST00000618865 P3H3Q8IVL6 736 aa25■■□□□ 1.59
SEMA3B-213ENST00000618865 DHX57Q6P158 1386 aaKnown RBP24.99■■□□□ 1.59
SEMA3B-213ENST00000618865 LAMC3Q9Y6N6 1575 aa24.99■■□□□ 1.59
SEMA3B-213ENST00000618865 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms