RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 AEBP2Q6ZN18 517 aaPredicted RBP24.74■■□□□ 1.55
SDF2-210ENST00000592250 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
SDF2-210ENST00000592250 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
SDF2-210ENST00000592250 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
SDF2-210ENST00000592250 FOXD1Q16676 465 aa19.54■□□□□ 0.72
SDF2-210ENST00000592250 PLPPR3Q6T4P5 718 aa19.24■□□□□ 0.67
SDF2-210ENST00000592250 PPP6R1Q9UPN7 881 aa18.64■□□□□ 0.57
SDF2-210ENST00000592250 ADRA2BP18089 450 aa18.59■□□□□ 0.57
SDF2-210ENST00000592250 NISCHQ9Y2I1 1504 aa18.33■□□□□ 0.53
SDF2-210ENST00000592250 PIAS4Q8N2W9 510 aaPredicted RBP18.33■□□□□ 0.52
SDF2-210ENST00000592250 MSH5O43196 834 aa18.06■□□□□ 0.48
SDF2-210ENST00000592250 MAPK8IP2Q13387 824 aaPredicted RBP16.97■□□□□ 0.31
SDF2-210ENST00000592250 PPP4R3CPQ6ZMV5 832 aa16.95■□□□□ 0.3
SDF2-210ENST00000592250 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
SDF2-210ENST00000592250 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
SDF2-210ENST00000592250 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
SDF2-210ENST00000592250 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
SDF2-210ENST00000592250 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
SDF2-210ENST00000592250 KCNA4P22459 653 aa16.28■□□□□ 0.2
SDF2-210ENST00000592250 HOXD11P31277 338 aaPredicted RBP16.27■□□□□ 0.2
SDF2-210ENST00000592250 RNF216Q9NWF9 866 aaPredicted RBP16.25■□□□□ 0.19
SDF2-210ENST00000592250 CCDC180Q9P1Z9 1646 aa16.23■□□□□ 0.19
SDF2-210ENST00000592250 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
SDF2-210ENST00000592250 ABCC9O60706 1549 aa16.07■□□□□ 0.16
SDF2-210ENST00000592250 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
SDF2-210ENST00000592250 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
SDF2-210ENST00000592250 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.49■□□□□ 0.07
SDF2-210ENST00000592250 RNF39Q9H2S5 420 aa15.48■□□□□ 0.07
SDF2-210ENST00000592250 SLC4A1APQ9BWU0 796 aaKnown RBP15.43■□□□□ 0.06
SDF2-210ENST00000592250 SLC4A2P04920 1241 aa15.38■□□□□ 0.05
SDF2-210ENST00000592250 ZCCHC6Q5VYS8 1495 aaKnown RBP15.31■□□□□ 0.04
SDF2-210ENST00000592250 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
SDF2-210ENST00000592250 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
SDF2-210ENST00000592250 U3KPZ7 1027 aaPredicted RBP15.24■□□□□ 0.03
SDF2-210ENST00000592250 NACADO15069 1562 aa15.22■□□□□ 0.03
SDF2-210ENST00000592250 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
SDF2-210ENST00000592250 DCAF1Q9Y4B6 1507 aa15.2■□□□□ 0.02
SDF2-210ENST00000592250 RB1CC1Q8TDY2 1594 aa15.18■□□□□ 0.02
SDF2-210ENST00000592250 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
SDF2-210ENST00000592250 FOXD4L1Q9NU39 408 aa15.01□□□□□ -0.01
SDF2-210ENST00000592250 ZBTB22O15209 634 aa14.99□□□□□ -0.01
SDF2-210ENST00000592250 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
SDF2-210ENST00000592250 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
SDF2-210ENST00000592250 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
SDF2-210ENST00000592250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.88□□□□□ -0.03
SDF2-210ENST00000592250 HNRNPUL2Q1KMD3 747 aaKnown RBP14.88□□□□□ -0.03
SDF2-210ENST00000592250 UNC13AQ9UPW8 1703 aa14.85□□□□□ -0.03
SDF2-210ENST00000592250 SAMD1Q6SPF0 538 aaPredicted RBP14.83□□□□□ -0.04
SDF2-210ENST00000592250 CAPN15O75808 1086 aa14.82□□□□□ -0.04
SDF2-210ENST00000592250 SCRIBQ14160 1630 aa14.78□□□□□ -0.04
SDF2-210ENST00000592250 APLP2Q06481 763 aa14.77□□□□□ -0.05
SDF2-210ENST00000592250 BICRAQ9NZM4 1560 aa14.76□□□□□ -0.05
SDF2-210ENST00000592250 TRHP20396 242 aaPredicted RBP14.71□□□□□ -0.05
SDF2-210ENST00000592250 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.05
SDF2-210ENST00000592250 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
SDF2-210ENST00000592250 DSG3P32926 999 aa14.65□□□□□ -0.06
SDF2-210ENST00000592250 ZNF219Q9P2Y4 722 aaPredicted RBP14.64□□□□□ -0.07
SDF2-210ENST00000592250 ATF5Q9Y2D1 282 aaPredicted RBP14.63□□□□□ -0.07
SDF2-210ENST00000592250 SHROOM4Q9ULL8 1493 aa14.61□□□□□ -0.07
SDF2-210ENST00000592250 ABCB7O75027 752 aa14.55□□□□□ -0.08
SDF2-210ENST00000592250 ATXN8OSP0DMR3 200 aa14.5□□□□□ -0.09
SDF2-210ENST00000592250 CECR2Q9BXF3 1484 aa14.46□□□□□ -0.09
SDF2-210ENST00000592250 POLA2Q14181 598 aa14.42□□□□□ -0.1
SDF2-210ENST00000592250 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
SDF2-210ENST00000592250 EIF4G1Q04637 1599 aaKnown RBP14.34□□□□□ -0.11
SDF2-210ENST00000592250 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
SDF2-210ENST00000592250 BAZ1AQ9NRL2 1556 aaPredicted RBP14.18□□□□□ -0.14
SDF2-210ENST00000592250 SMARCA4P51532 1647 aa14.18□□□□□ -0.14
SDF2-210ENST00000592250 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
SDF2-210ENST00000592250 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.16
SDF2-210ENST00000592250 PEG3Q9GZU2 1588 aa14.08□□□□□ -0.16
SDF2-210ENST00000592250 ATAD2BQ9ULI0 1458 aa14.07□□□□□ -0.16
SDF2-210ENST00000592250 NCAPD3P42695 1498 aa14.06□□□□□ -0.16
SDF2-210ENST00000592250 SMARCA2P51531 1590 aa14.05□□□□□ -0.16
SDF2-210ENST00000592250 RSF1Q96T23 1441 aaPredicted RBP14.02□□□□□ -0.16
SDF2-210ENST00000592250 HMGXB3Q12766 1538 aa13.99□□□□□ -0.17
SDF2-210ENST00000592250 WIZO95785 1651 aa13.98□□□□□ -0.17
SDF2-210ENST00000592250 MKRN4PQ13434 485 aaPredicted RBP13.96□□□□□ -0.17
SDF2-210ENST00000592250 FBLN2P98095 1184 aa13.95□□□□□ -0.18
SDF2-210ENST00000592250 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
SDF2-210ENST00000592250 SUPT5HO00267 1087 aaKnown RBP13.94□□□□□ -0.18
SDF2-210ENST00000592250 OSCARQ8IYS5 282 aa13.92□□□□□ -0.18
SDF2-210ENST00000592250 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
SDF2-210ENST00000592250 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
SDF2-210ENST00000592250 CUX2O14529 1486 aa13.87□□□□□ -0.19
SDF2-210ENST00000592250 TOP2AP11388 1531 aaKnown RBP13.84□□□□□ -0.19
SDF2-210ENST00000592250 SPDYE2BA6NHP3 402 aa13.71□□□□□ -0.21
SDF2-210ENST00000592250 SPDYE6P0CI01 402 aa13.71□□□□□ -0.21
SDF2-210ENST00000592250 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.21
SDF2-210ENST00000592250 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
SDF2-210ENST00000592250 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
SDF2-210ENST00000592250 NESP48681 1621 aa13.68□□□□□ -0.22
SDF2-210ENST00000592250 CCDC88BA6NC98 1476 aa13.67□□□□□ -0.22
SDF2-210ENST00000592250 ZNF692Q9BU19 519 aaPredicted RBP13.65□□□□□ -0.22
SDF2-210ENST00000592250 LAMC3Q9Y6N6 1575 aa13.65□□□□□ -0.22
SDF2-210ENST00000592250 CADPSQ9ULU8 1353 aa13.63□□□□□ -0.23
SDF2-210ENST00000592250 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
SDF2-210ENST00000592250 CFTRP13569 1480 aa13.61□□□□□ -0.23
SDF2-210ENST00000592250 SSUH2Q9Y2M2 353 aa13.6□□□□□ -0.23
SDF2-210ENST00000592250 PDS5BQ9NTI5 1447 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms