RNA–Protein interactions for RNA: ENST00000415593.5

P4HB-202, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 1 (best)

Gene P4HB, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-202ENST00000415593 NISCHQ9Y2I1 1504 aa38.07■■■■□ 3.68
P4HB-202ENST00000415593 CCDC180Q9P1Z9 1646 aa33■■■□□ 2.87
P4HB-202ENST00000415593 ZCCHC6Q5VYS8 1495 aaKnown RBP32.04■■■□□ 2.72
P4HB-202ENST00000415593 DCAF1Q9Y4B6 1507 aa31.52■■■□□ 2.64
P4HB-202ENST00000415593 DCAF8L2P0C7V8 631 aa31.35■■■□□ 2.61
P4HB-202ENST00000415593 SHROOM4Q9ULL8 1493 aa31.23■■■□□ 2.59
P4HB-202ENST00000415593 MYO15BQ96JP2 1530 aa31.05■■■□□ 2.56
P4HB-202ENST00000415593 ABCC9O60706 1549 aa30.92■■■□□ 2.54
P4HB-202ENST00000415593 NACADO15069 1562 aa30.72■■■□□ 2.51
P4HB-202ENST00000415593 SCRIBQ14160 1630 aa30.36■■■□□ 2.45
P4HB-202ENST00000415593 RB1CC1Q8TDY2 1594 aa30.35■■■□□ 2.45
P4HB-202ENST00000415593 SUPT5HO00267 1087 aaKnown RBP30.27■■■□□ 2.44
P4HB-202ENST00000415593 RSF1Q96T23 1441 aaPredicted RBP29.67■■■□□ 2.34
P4HB-202ENST00000415593 UNC13AQ9UPW8 1703 aa29.61■■■□□ 2.33
P4HB-202ENST00000415593 CECR2Q9BXF3 1484 aa29.53■■■□□ 2.32
P4HB-202ENST00000415593 MROH2BQ7Z745 1585 aa29.4■■■□□ 2.3
P4HB-202ENST00000415593 BICRAQ9NZM4 1560 aa29.39■■■□□ 2.3
P4HB-202ENST00000415593 BAZ1AQ9NRL2 1556 aaPredicted RBP29.37■■■□□ 2.29
P4HB-202ENST00000415593 PABPN1Q86U42 306 aaKnown RBP eCLIP29.26■■■□□ 2.27
P4HB-202ENST00000415593 CHIC1Q5VXU3 224 aa29.18■■■□□ 2.26
P4HB-202ENST00000415593 SMARCA4P51532 1647 aa29.15■■■□□ 2.26
P4HB-202ENST00000415593 WIZO95785 1651 aa29.13■■■□□ 2.25
P4HB-202ENST00000415593 TOP2AP11388 1531 aaKnown RBP28.89■■■□□ 2.22
P4HB-202ENST00000415593 PEG3Q9GZU2 1588 aa28.83■■■□□ 2.21
P4HB-202ENST00000415593 ATAD2BQ9ULI0 1458 aa28.65■■■□□ 2.18
P4HB-202ENST00000415593 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
P4HB-202ENST00000415593 CCDC88BA6NC98 1476 aa28.62■■■□□ 2.17
P4HB-202ENST00000415593 EIF4G1Q04637 1599 aaKnown RBP28.49■■■□□ 2.15
P4HB-202ENST00000415593 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
P4HB-202ENST00000415593 TRIM41Q8WV44 630 aa28.48■■■□□ 2.15
P4HB-202ENST00000415593 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
P4HB-202ENST00000415593 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
P4HB-202ENST00000415593 ABCC8Q09428 1581 aa28.05■■■□□ 2.08
P4HB-202ENST00000415593 LOC105371045A0A1W2PR82 267 aa28.03■■■□□ 2.08
P4HB-202ENST00000415593 CC2D2AQ9P2K1 1620 aa27.97■■■□□ 2.07
P4HB-202ENST00000415593 WRNQ14191 1432 aaPredicted RBP eCLIP27.92■■■□□ 2.06
P4HB-202ENST00000415593 FAM9AQ8IZU1 332 aaPredicted RBP27.9■■■□□ 2.06
P4HB-202ENST00000415593 CFTRP13569 1480 aa27.83■■■□□ 2.05
P4HB-202ENST00000415593 EEA1Q15075 1411 aa27.75■■■□□ 2.03
P4HB-202ENST00000415593 SYNJ1O43426 1573 aa27.72■■■□□ 2.03
P4HB-202ENST00000415593 CADPSQ9ULU8 1353 aa27.68■■■□□ 2.02
P4HB-202ENST00000415593 SOGA1O94964 1423 aa27.65■■■□□ 2.02
P4HB-202ENST00000415593 TOP2BQ02880 1626 aa27.62■■■□□ 2.01
P4HB-202ENST00000415593 DNAJC5BQ9UF47 199 aa27.58■■■□□ 2.01
P4HB-202ENST00000415593 CSRNP3Q8WYN3 585 aa27.56■■■□□ 2
P4HB-202ENST00000415593 PRDM2Q13029 1718 aa27.56■■■□□ 2
P4HB-202ENST00000415593 BIVM-ERCC5R4GMW8 1640 aa27.56■■■□□ 2
P4HB-202ENST00000415593 RUSC2Q8N2Y8 1516 aa27.5■■□□□ 1.99
P4HB-202ENST00000415593 CUX1P39880 1505 aa27.47■■□□□ 1.99
P4HB-202ENST00000415593 EHMT2Q96KQ7 1210 aa27.44■■□□□ 1.98
P4HB-202ENST00000415593 TNIKQ9UKE5 1360 aa27.34■■□□□ 1.97
P4HB-202ENST00000415593 GOLGA3Q08378 1498 aa27.33■■□□□ 1.97
P4HB-202ENST00000415593 FANCD2Q9BXW9 1451 aa27.33■■□□□ 1.97
P4HB-202ENST00000415593 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
P4HB-202ENST00000415593 LAMC3Q9Y6N6 1575 aa27.31■■□□□ 1.96
P4HB-202ENST00000415593 KIF21BO75037 1637 aa27.28■■□□□ 1.96
P4HB-202ENST00000415593 NESP48681 1621 aa27.23■■□□□ 1.95
P4HB-202ENST00000415593 KIF27Q86VH2 1401 aa27.22■■□□□ 1.95
P4HB-202ENST00000415593 UBTFP17480 764 aaKnown RBP27.21■■□□□ 1.95
P4HB-202ENST00000415593 CEP162Q5TB80 1403 aa27.17■■□□□ 1.94
P4HB-202ENST00000415593 PDS5BQ9NTI5 1447 aa27.15■■□□□ 1.94
P4HB-202ENST00000415593 DNMBPQ6XZF7 1577 aa27.13■■□□□ 1.93
P4HB-202ENST00000415593 FGD5Q6ZNL6 1462 aa27.12■■□□□ 1.93
P4HB-202ENST00000415593 PCGF6Q9BYE7 350 aa27.1■■□□□ 1.93
P4HB-202ENST00000415593 PRXQ9BXM0 1461 aa27.1■■□□□ 1.93
P4HB-202ENST00000415593 TRIM26Q12899 539 aaPredicted RBP27.08■■□□□ 1.93
P4HB-202ENST00000415593 ERICH3Q5RHP9 1530 aa27.07■■□□□ 1.92
P4HB-202ENST00000415593 RAPGEF2Q9Y4G8 1499 aa27.07■■□□□ 1.92
P4HB-202ENST00000415593 TOPBP1Q92547 1522 aa27.07■■□□□ 1.92
P4HB-202ENST00000415593 CUX2O14529 1486 aa27.03■■□□□ 1.92
P4HB-202ENST00000415593 POLA1P09884 1462 aaPredicted RBP26.96■■□□□ 1.91
P4HB-202ENST00000415593 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.91
P4HB-202ENST00000415593 IGF1RP08069 1367 aa26.94■■□□□ 1.9
P4HB-202ENST00000415593 ABCA10Q8WWZ4 1543 aa26.93■■□□□ 1.9
P4HB-202ENST00000415593 CLIP1P30622 1438 aa26.9■■□□□ 1.9
P4HB-202ENST00000415593 RAD54L2Q9Y4B4 1467 aa26.86■■□□□ 1.89
P4HB-202ENST00000415593 KIF21AQ7Z4S6 1674 aa26.84■■□□□ 1.89
P4HB-202ENST00000415593 CARMIL1Q5VZK9 1371 aa26.81■■□□□ 1.88
P4HB-202ENST00000415593 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
P4HB-202ENST00000415593 VPS8Q8N3P4 1428 aa26.72■■□□□ 1.87
P4HB-202ENST00000415593 WDR97A6NE52 1622 aa26.71■■□□□ 1.87
P4HB-202ENST00000415593 PPARGC1BQ86YN6 1023 aaKnown RBP26.64■■□□□ 1.86
P4HB-202ENST00000415593 CUL7Q14999 1698 aa26.64■■□□□ 1.85
P4HB-202ENST00000415593 ABCA5Q8WWZ7 1642 aa26.62■■□□□ 1.85
P4HB-202ENST00000415593 HRCP23327 699 aa26.62■■□□□ 1.85
P4HB-202ENST00000415593 GAPVD1Q14C86 1478 aa26.6■■□□□ 1.85
P4HB-202ENST00000415593 RANGAP1P46060 587 aaPredicted RBP26.6■■□□□ 1.85
P4HB-202ENST00000415593 TDRD9Q8NDG6 1382 aaKnown RBP26.6■■□□□ 1.85
P4HB-202ENST00000415593 TARBP1Q13395 1621 aaKnown RBP26.6■■□□□ 1.85
P4HB-202ENST00000415593 WDR62O43379 1518 aa26.57■■□□□ 1.84
P4HB-202ENST00000415593 ARAP1Q96P48 1450 aa26.56■■□□□ 1.84
P4HB-202ENST00000415593 APLP2Q06481 763 aa26.52■■□□□ 1.84
P4HB-202ENST00000415593 ARHGAP35Q9NRY4 1499 aa26.52■■□□□ 1.84
P4HB-202ENST00000415593 ERCC6Q03468 1493 aa26.51■■□□□ 1.83
P4HB-202ENST00000415593 IFT140Q96RY7 1462 aa26.49■■□□□ 1.83
P4HB-202ENST00000415593 GRIN2BQ13224 1484 aa26.37■■□□□ 1.81
P4HB-202ENST00000415593 THOC2Q8NI27 1593 aaKnown RBP26.36■■□□□ 1.81
P4HB-202ENST00000415593 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.812e-7■■■■□ 20.6
P4HB-202ENST00000415593 TTBK1Q5TCY1 1321 aaPredicted RBP26.35■■□□□ 1.81
P4HB-202ENST00000415593 FHAD1B1AJZ9 1412 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms