RNA–Protein interactions for RNA: ENST00000476482.1

P4HB-210, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 1 (best)

Gene P4HB, Length 765 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-210ENST00000476482 NISCHQ9Y2I1 1504 aa30.34■■■□□ 2.45
P4HB-210ENST00000476482 CCDC180Q9P1Z9 1646 aa26.87■■□□□ 1.89
P4HB-210ENST00000476482 ABCC9O60706 1549 aa25.86■■□□□ 1.73
P4HB-210ENST00000476482 ZCCHC6Q5VYS8 1495 aaKnown RBP25.36■■□□□ 1.65
P4HB-210ENST00000476482 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
P4HB-210ENST00000476482 MYO15BQ96JP2 1530 aa25.16■■□□□ 1.62
P4HB-210ENST00000476482 NACADO15069 1562 aa25.15■■□□□ 1.62
P4HB-210ENST00000476482 RB1CC1Q8TDY2 1594 aa25.07■■□□□ 1.6
P4HB-210ENST00000476482 DCAF8L2P0C7V8 631 aa25.04■■□□□ 1.6
P4HB-210ENST00000476482 UNC13AQ9UPW8 1703 aa24.56■■□□□ 1.52
P4HB-210ENST00000476482 SCRIBQ14160 1630 aa24.47■■□□□ 1.51
P4HB-210ENST00000476482 BICRAQ9NZM4 1560 aa24.35■■□□□ 1.49
P4HB-210ENST00000476482 PABPN1Q86U42 306 aaKnown RBP eCLIP24.18■■□□□ 1.46
P4HB-210ENST00000476482 SHROOM4Q9ULL8 1493 aa24.14■■□□□ 1.46
P4HB-210ENST00000476482 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
P4HB-210ENST00000476482 DNAJC5BQ9UF47 199 aa23.63■■□□□ 1.37
P4HB-210ENST00000476482 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.37
P4HB-210ENST00000476482 BAZ1AQ9NRL2 1556 aaPredicted RBP23.49■■□□□ 1.35
P4HB-210ENST00000476482 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
P4HB-210ENST00000476482 CC2D2AQ9P2K1 1620 aa23.45■■□□□ 1.34
P4HB-210ENST00000476482 MROH2BQ7Z745 1585 aa23.38■■□□□ 1.33
P4HB-210ENST00000476482 PEG3Q9GZU2 1588 aa23.29■■□□□ 1.32
P4HB-210ENST00000476482 ATAD2BQ9ULI0 1458 aa23.24■■□□□ 1.31
P4HB-210ENST00000476482 SMARCA2P51531 1590 aa23.24■■□□□ 1.31
P4HB-210ENST00000476482 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
P4HB-210ENST00000476482 NCAPD3P42695 1498 aa23.2■■□□□ 1.3
P4HB-210ENST00000476482 HMGXB3Q12766 1538 aa23.14■■□□□ 1.3
P4HB-210ENST00000476482 WIZO95785 1651 aa23.14■■□□□ 1.29
P4HB-210ENST00000476482 BAZ1BQ9UIG0 1483 aaKnown RBP23.06■■□□□ 1.28
P4HB-210ENST00000476482 TOP2AP11388 1531 aaKnown RBP22.93■■□□□ 1.26
P4HB-210ENST00000476482 SUPT5HO00267 1087 aaKnown RBP22.78■■□□□ 1.24
P4HB-210ENST00000476482 CCDC88BA6NC98 1476 aa22.64■■□□□ 1.21
P4HB-210ENST00000476482 LAMC3Q9Y6N6 1575 aa22.53■■□□□ 1.2
P4HB-210ENST00000476482 CADPSQ9ULU8 1353 aa22.51■■□□□ 1.19
P4HB-210ENST00000476482 NESP48681 1621 aa22.5■■□□□ 1.19
P4HB-210ENST00000476482 CFTRP13569 1480 aa22.48■■□□□ 1.19
P4HB-210ENST00000476482 PRDM2Q13029 1718 aa22.38■■□□□ 1.17
P4HB-210ENST00000476482 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
P4HB-210ENST00000476482 KIF21AQ7Z4S6 1674 aa22.29■■□□□ 1.16
P4HB-210ENST00000476482 ERCC6Q03468 1493 aa22.25■■□□□ 1.15
P4HB-210ENST00000476482 FANCD2Q9BXW9 1451 aa22.25■■□□□ 1.15
P4HB-210ENST00000476482 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
P4HB-210ENST00000476482 THOC2Q8NI27 1593 aaKnown RBP22.14■■□□□ 1.13
P4HB-210ENST00000476482 MRC2Q9UBG0 1479 aa22.1■■□□□ 1.13
P4HB-210ENST00000476482 WDR62O43379 1518 aa22.05■■□□□ 1.12
P4HB-210ENST00000476482 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
P4HB-210ENST00000476482 DNMBPQ6XZF7 1577 aa21.97■■□□□ 1.11
P4HB-210ENST00000476482 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
P4HB-210ENST00000476482 CUX2O14529 1486 aa21.96■■□□□ 1.11
P4HB-210ENST00000476482 TOPBP1Q92547 1522 aa21.95■■□□□ 1.1
P4HB-210ENST00000476482 CUX1P39880 1505 aa21.91■■□□□ 1.1
P4HB-210ENST00000476482 WRNQ14191 1432 aaPredicted RBP eCLIP21.88■■□□□ 1.09
P4HB-210ENST00000476482 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
P4HB-210ENST00000476482 TOP2BQ02880 1626 aa21.84■■□□□ 1.09
P4HB-210ENST00000476482 SYNJ1O43426 1573 aa21.83■■□□□ 1.09
P4HB-210ENST00000476482 POLA1P09884 1462 aaPredicted RBP21.79■■□□□ 1.08
P4HB-210ENST00000476482 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
P4HB-210ENST00000476482 DNAJC5Q9H3Z4 198 aa21.74■■□□□ 1.07
P4HB-210ENST00000476482 IFT140Q96RY7 1462 aa21.72■■□□□ 1.07
P4HB-210ENST00000476482 TARBP1Q13395 1621 aaKnown RBP21.72■■□□□ 1.07
P4HB-210ENST00000476482 RAD54L2Q9Y4B4 1467 aa21.66■■□□□ 1.06
P4HB-210ENST00000476482 SOGA1O94964 1423 aa21.66■■□□□ 1.06
P4HB-210ENST00000476482 WDR97A6NE52 1622 aa21.64■■□□□ 1.05
P4HB-210ENST00000476482 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
P4HB-210ENST00000476482 ZNF608Q9ULD9 1512 aaPredicted RBP21.59■■□□□ 1.05
P4HB-210ENST00000476482 EIF4G3O43432 1585 aaKnown RBP21.54■■□□□ 1.04
P4HB-210ENST00000476482 CHIC1Q5VXU3 224 aa21.53■■□□□ 1.04
P4HB-210ENST00000476482 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
P4HB-210ENST00000476482 ABCA5Q8WWZ7 1642 aa21.51■■□□□ 1.03
P4HB-210ENST00000476482 TDRD9Q8NDG6 1382 aaKnown RBP21.49■■□□□ 1.03
P4HB-210ENST00000476482 AQRO60306 1485 aaKnown RBP eCLIP21.49■■□□□ 1.033e-7■■■■□ 21.5
P4HB-210ENST00000476482 GAPVD1Q14C86 1478 aa21.44■■□□□ 1.02
P4HB-210ENST00000476482 PBRM1Q86U86 1689 aa21.4■■□□□ 1.02
P4HB-210ENST00000476482 GRIN2BQ13224 1484 aa21.39■■□□□ 1.02
P4HB-210ENST00000476482 KIF27Q86VH2 1401 aa21.38■■□□□ 1.01
P4HB-210ENST00000476482 ERICH3Q5RHP9 1530 aa21.35■■□□□ 1.01
P4HB-210ENST00000476482 MAGI1Q96QZ7 1491 aaPredicted RBP21.32■■□□□ 1
P4HB-210ENST00000476482 SNAPC4Q5SXM2 1469 aa21.31■■□□□ 1
P4HB-210ENST00000476482 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
P4HB-210ENST00000476482 IGF1RP08069 1367 aa21.26■□□□□ 0.99
P4HB-210ENST00000476482 ADAMTS12P58397 1594 aa21.26■□□□□ 0.99
P4HB-210ENST00000476482 SYNJ2O15056 1496 aa21.23■□□□□ 0.99
P4HB-210ENST00000476482 CUL7Q14999 1698 aa21.23■□□□□ 0.99
P4HB-210ENST00000476482 EEA1Q15075 1411 aa21.22■□□□□ 0.99
P4HB-210ENST00000476482 CHD1O14646 1710 aa21.21■□□□□ 0.99
P4HB-210ENST00000476482 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
P4HB-210ENST00000476482 CARMIL1Q5VZK9 1371 aa21.13■□□□□ 0.97
P4HB-210ENST00000476482 GRIN2AQ12879 1464 aa21.13■□□□□ 0.97
P4HB-210ENST00000476482 CHMP7Q8WUX9 453 aaPredicted RBP21.12■□□□□ 0.97
P4HB-210ENST00000476482 PRXQ9BXM0 1461 aa21.1■□□□□ 0.97
P4HB-210ENST00000476482 CSRNP3Q8WYN3 585 aa21.09■□□□□ 0.97
P4HB-210ENST00000476482 FBLN2P98095 1184 aa21.08■□□□□ 0.97
P4HB-210ENST00000476482 RAPGEF2Q9Y4G8 1499 aa21.05■□□□□ 0.96
P4HB-210ENST00000476482 NUP160Q12769 1436 aa21.04■□□□□ 0.96
P4HB-210ENST00000476482 OSCARQ8IYS5 282 aa21.04■□□□□ 0.96
P4HB-210ENST00000476482 FAM9AQ8IZU1 332 aaPredicted RBP21.03■□□□□ 0.96
P4HB-210ENST00000476482 CEP170Q5SW79 1584 aa21.02■□□□□ 0.96
P4HB-210ENST00000476482 KIF21BO75037 1637 aa21■□□□□ 0.95
P4HB-210ENST00000476482 CLASP1Q7Z460 1538 aa21■□□□□ 0.95
P4HB-210ENST00000476482 KIAA0586Q9BVV6 1533 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms