RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 AEBP2Q6ZN18 517 aaPredicted RBP24.74■■□□□ 1.55
SDF2-203ENST00000585749 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
SDF2-203ENST00000585749 NISCHQ9Y2I1 1504 aa23.42■■□□□ 1.34
SDF2-203ENST00000585749 ABCC9O60706 1549 aa21.7■■□□□ 1.06
SDF2-203ENST00000585749 CCDC180Q9P1Z9 1646 aa21.26■□□□□ 0.99
SDF2-203ENST00000585749 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
SDF2-203ENST00000585749 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
SDF2-203ENST00000585749 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
SDF2-203ENST00000585749 RB1CC1Q8TDY2 1594 aa20.44■□□□□ 0.86
SDF2-203ENST00000585749 NACADO15069 1562 aa20.19■□□□□ 0.82
SDF2-203ENST00000585749 PABPN1Q86U42 306 aaKnown RBP eCLIP20.09■□□□□ 0.81
SDF2-203ENST00000585749 UNC13AQ9UPW8 1703 aa20.03■□□□□ 0.8
SDF2-203ENST00000585749 BICRAQ9NZM4 1560 aa19.91■□□□□ 0.78
SDF2-203ENST00000585749 DCAF8L2P0C7V8 631 aa19.88■□□□□ 0.77
SDF2-203ENST00000585749 MYO15BQ96JP2 1530 aa19.76■□□□□ 0.75
SDF2-203ENST00000585749 CC2D2AQ9P2K1 1620 aa19.6■□□□□ 0.73
SDF2-203ENST00000585749 CECR2Q9BXF3 1484 aa19.6■□□□□ 0.73
SDF2-203ENST00000585749 SHROOM4Q9ULL8 1493 aa19.56■□□□□ 0.72
SDF2-203ENST00000585749 FOXD1Q16676 465 aa19.54■□□□□ 0.72
SDF2-203ENST00000585749 DNAJC5Q9H3Z4 198 aa19.44■□□□□ 0.7
SDF2-203ENST00000585749 EIF4G1Q04637 1599 aaKnown RBP19.44■□□□□ 0.7
SDF2-203ENST00000585749 DCAF1Q9Y4B6 1507 aa19.32■□□□□ 0.68
SDF2-203ENST00000585749 ZCCHC6Q5VYS8 1495 aaKnown RBP19.32■□□□□ 0.68
SDF2-203ENST00000585749 SCRIBQ14160 1630 aa19.32■□□□□ 0.68
SDF2-203ENST00000585749 PLPPR3Q6T4P5 718 aa19.24■□□□□ 0.67
SDF2-203ENST00000585749 CUX2O14529 1486 aa18.91■□□□□ 0.62
SDF2-203ENST00000585749 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
SDF2-203ENST00000585749 NCAPD3P42695 1498 aa18.65■□□□□ 0.58
SDF2-203ENST00000585749 PPP6R1Q9UPN7 881 aa18.64■□□□□ 0.57
SDF2-203ENST00000585749 ADRA2BP18089 450 aa18.59■□□□□ 0.57
SDF2-203ENST00000585749 NESP48681 1621 aa18.52■□□□□ 0.55
SDF2-203ENST00000585749 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.55
SDF2-203ENST00000585749 HMGXB3Q12766 1538 aa18.48■□□□□ 0.55
SDF2-203ENST00000585749 THOC2Q8NI27 1593 aaKnown RBP18.46■□□□□ 0.55
SDF2-203ENST00000585749 SMARCA2P51531 1590 aa18.43■□□□□ 0.54
SDF2-203ENST00000585749 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
SDF2-203ENST00000585749 TRIM41Q8WV44 630 aa18.35■□□□□ 0.53
SDF2-203ENST00000585749 PIAS4Q8N2W9 510 aaPredicted RBP18.33■□□□□ 0.52
SDF2-203ENST00000585749 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
SDF2-203ENST00000585749 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
SDF2-203ENST00000585749 KIF21AQ7Z4S6 1674 aa18.28■□□□□ 0.52
SDF2-203ENST00000585749 PEG3Q9GZU2 1588 aa18.22■□□□□ 0.51
SDF2-203ENST00000585749 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
SDF2-203ENST00000585749 PDS5BQ9NTI5 1447 aa18.18■□□□□ 0.5
SDF2-203ENST00000585749 MRC2Q9UBG0 1479 aa18.08■□□□□ 0.49
SDF2-203ENST00000585749 WDR62O43379 1518 aa18.08■□□□□ 0.48
SDF2-203ENST00000585749 MSH5O43196 834 aa18.06■□□□□ 0.48
SDF2-203ENST00000585749 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
SDF2-203ENST00000585749 CADPSQ9ULU8 1353 aa18.03■□□□□ 0.48
SDF2-203ENST00000585749 OSCARQ8IYS5 282 aa17.91■□□□□ 0.46
SDF2-203ENST00000585749 CEP164Q9UPV0 1460 aa17.9■□□□□ 0.46
SDF2-203ENST00000585749 FANCD2Q9BXW9 1451 aa17.83■□□□□ 0.45
SDF2-203ENST00000585749 WIZO95785 1651 aa17.81■□□□□ 0.44
SDF2-203ENST00000585749 RIMBP3CA6NJZ7 1639 aa17.8■□□□□ 0.44
SDF2-203ENST00000585749 RIMBP3BA6NNM3 1639 aa17.8■□□□□ 0.44
SDF2-203ENST00000585749 RIMBP3Q9UFD9 1639 aa17.8■□□□□ 0.44
SDF2-203ENST00000585749 CFTRP13569 1480 aa17.75■□□□□ 0.43
SDF2-203ENST00000585749 URB2Q14146 1524 aaKnown RBP17.74■□□□□ 0.43
SDF2-203ENST00000585749 ARHGEF11O15085 1522 aa17.69■□□□□ 0.42
SDF2-203ENST00000585749 ZNF608Q9ULD9 1512 aaPredicted RBP17.6■□□□□ 0.41
SDF2-203ENST00000585749 PRDM2Q13029 1718 aa17.56■□□□□ 0.4
SDF2-203ENST00000585749 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
SDF2-203ENST00000585749 TOP2AP11388 1531 aaKnown RBP17.54■□□□□ 0.4
SDF2-203ENST00000585749 CYB5RLQ6IPT4 315 aa17.53■□□□□ 0.4
SDF2-203ENST00000585749 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
SDF2-203ENST00000585749 ARAP1Q96P48 1450 aa17.49■□□□□ 0.39
SDF2-203ENST00000585749 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
SDF2-203ENST00000585749 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
SDF2-203ENST00000585749 CHD1O14646 1710 aa17.46■□□□□ 0.39
SDF2-203ENST00000585749 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
SDF2-203ENST00000585749 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
SDF2-203ENST00000585749 AQRO60306 1485 aaKnown RBP eCLIP17.36■□□□□ 0.372e-8■■■□□ 18.6
SDF2-203ENST00000585749 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
SDF2-203ENST00000585749 DNMBPQ6XZF7 1577 aa17.35■□□□□ 0.37
SDF2-203ENST00000585749 CCDC88BA6NC98 1476 aa17.33■□□□□ 0.37
SDF2-203ENST00000585749 FBLN2P98095 1184 aa17.29■□□□□ 0.36
SDF2-203ENST00000585749 POLA1P09884 1462 aaPredicted RBP17.25■□□□□ 0.35
SDF2-203ENST00000585749 CLASP1Q7Z460 1538 aa17.25■□□□□ 0.35
SDF2-203ENST00000585749 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
SDF2-203ENST00000585749 SNAPC4Q5SXM2 1469 aa17.18■□□□□ 0.34
SDF2-203ENST00000585749 SYNJ1O43426 1573 aa17.17■□□□□ 0.34
SDF2-203ENST00000585749 TDRD9Q8NDG6 1382 aaKnown RBP17.16■□□□□ 0.34
SDF2-203ENST00000585749 WDR97A6NE52 1622 aa17.14■□□□□ 0.33
SDF2-203ENST00000585749 SOGA1O94964 1423 aa17.13■□□□□ 0.33
SDF2-203ENST00000585749 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
SDF2-203ENST00000585749 CHMP7Q8WUX9 453 aaPredicted RBP17.09■□□□□ 0.33
SDF2-203ENST00000585749 GAPVD1Q14C86 1478 aa17.07■□□□□ 0.32
SDF2-203ENST00000585749 SYNJ2O15056 1496 aa17.06■□□□□ 0.32
SDF2-203ENST00000585749 FGD5Q6ZNL6 1462 aa17.06■□□□□ 0.32
SDF2-203ENST00000585749 GRIN2BQ13224 1484 aa17.05■□□□□ 0.32
SDF2-203ENST00000585749 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
SDF2-203ENST00000585749 CUX1P39880 1505 aa16.98■□□□□ 0.31
SDF2-203ENST00000585749 MAPK8IP2Q13387 824 aaPredicted RBP16.97■□□□□ 0.31
SDF2-203ENST00000585749 PPP4R3CPQ6ZMV5 832 aa16.95■□□□□ 0.3
SDF2-203ENST00000585749 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
SDF2-203ENST00000585749 ERCC6L2Q5T890 1561 aa16.94■□□□□ 0.3
SDF2-203ENST00000585749 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
SDF2-203ENST00000585749 ABCA5Q8WWZ7 1642 aa16.89■□□□□ 0.29
SDF2-203ENST00000585749 KIF13AQ9H1H9 1805 aa16.88■□□□□ 0.29
SDF2-203ENST00000585749 CEP170Q5SW79 1584 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms