RNA–Protein interactions for RNA: ENST00000421003.5

LINC01341-202, Transcript of long intergenic non-protein coding RNA 1341, humanhuman

TSL 2 BASIC

Gene LINC01341, Length 2,600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01341-202ENST00000421003 NISCHQ9Y2I1 1504 aa30.54■■■□□ 2.48
LINC01341-202ENST00000421003 CCDC180Q9P1Z9 1646 aa26.38■■□□□ 1.81
LINC01341-202ENST00000421003 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
LINC01341-202ENST00000421003 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
LINC01341-202ENST00000421003 DCAF8L2P0C7V8 631 aa25.26■■□□□ 1.63
LINC01341-202ENST00000421003 DCAF1Q9Y4B6 1507 aa25.21■■□□□ 1.63
LINC01341-202ENST00000421003 MYO15BQ96JP2 1530 aa24.77■■□□□ 1.56
LINC01341-202ENST00000421003 ABCC9O60706 1549 aa24.74■■□□□ 1.55
LINC01341-202ENST00000421003 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
LINC01341-202ENST00000421003 NACADO15069 1562 aa24.53■■□□□ 1.52
LINC01341-202ENST00000421003 SCRIBQ14160 1630 aa24.39■■□□□ 1.5
LINC01341-202ENST00000421003 RB1CC1Q8TDY2 1594 aa24.24■■□□□ 1.47
LINC01341-202ENST00000421003 RSF1Q96T23 1441 aaPredicted RBP23.87■■□□□ 1.41
LINC01341-202ENST00000421003 CECR2Q9BXF3 1484 aa23.74■■□□□ 1.39
LINC01341-202ENST00000421003 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
LINC01341-202ENST00000421003 UNC13AQ9UPW8 1703 aa23.72■■□□□ 1.39
LINC01341-202ENST00000421003 MROH2BQ7Z745 1585 aa23.63■■□□□ 1.37
LINC01341-202ENST00000421003 BAZ1AQ9NRL2 1556 aaPredicted RBP23.54■■□□□ 1.36
LINC01341-202ENST00000421003 BICRAQ9NZM4 1560 aa23.5■■□□□ 1.35
LINC01341-202ENST00000421003 PABPN1Q86U42 306 aaKnown RBP eCLIP23.46■■□□□ 1.35
LINC01341-202ENST00000421003 WIZO95785 1651 aa23.45■■□□□ 1.34
LINC01341-202ENST00000421003 SMARCA4P51532 1647 aa23.38■■□□□ 1.33
LINC01341-202ENST00000421003 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
LINC01341-202ENST00000421003 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
LINC01341-202ENST00000421003 HRCP23327 699 aa23.02■■□□□ 1.28
LINC01341-202ENST00000421003 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
LINC01341-202ENST00000421003 CCDC88BA6NC98 1476 aa23■■□□□ 1.27
LINC01341-202ENST00000421003 SMARCA2P51531 1590 aa22.99■■□□□ 1.27
LINC01341-202ENST00000421003 EIF4G1Q04637 1599 aaKnown RBP22.94■■□□□ 1.26
LINC01341-202ENST00000421003 ATAD2BQ9ULI0 1458 aa22.94■■□□□ 1.26
LINC01341-202ENST00000421003 LOC105371045A0A1W2PR82 267 aa22.93■■□□□ 1.26
LINC01341-202ENST00000421003 BAZ1BQ9UIG0 1483 aaKnown RBP22.83■■□□□ 1.25
LINC01341-202ENST00000421003 PPARGC1BQ86YN6 1023 aaKnown RBP22.78■■□□□ 1.24
LINC01341-202ENST00000421003 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.22
LINC01341-202ENST00000421003 PCGF6Q9BYE7 350 aa22.69■■□□□ 1.22
LINC01341-202ENST00000421003 ABCC8Q09428 1581 aa22.67■■□□□ 1.22
LINC01341-202ENST00000421003 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
LINC01341-202ENST00000421003 HMGXB3Q12766 1538 aa22.63■■□□□ 1.21
LINC01341-202ENST00000421003 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
LINC01341-202ENST00000421003 EHMT2Q96KQ7 1210 aa22.44■■□□□ 1.18
LINC01341-202ENST00000421003 CC2D2AQ9P2K1 1620 aa22.35■■□□□ 1.17
LINC01341-202ENST00000421003 SOGA1O94964 1423 aa22.35■■□□□ 1.17
LINC01341-202ENST00000421003 SYNJ1O43426 1573 aa22.32■■□□□ 1.16
LINC01341-202ENST00000421003 EEA1Q15075 1411 aa22.31■■□□□ 1.16
LINC01341-202ENST00000421003 RUSC2Q8N2Y8 1516 aa22.27■■□□□ 1.16
LINC01341-202ENST00000421003 CFTRP13569 1480 aa22.27■■□□□ 1.16
LINC01341-202ENST00000421003 CSRNP3Q8WYN3 585 aa22.22■■□□□ 1.15
LINC01341-202ENST00000421003 TOP2BQ02880 1626 aa22.19■■□□□ 1.14
LINC01341-202ENST00000421003 CADPSQ9ULU8 1353 aa22.14■■□□□ 1.13
LINC01341-202ENST00000421003 BIVM-ERCC5R4GMW8 1640 aa22.13■■□□□ 1.13
LINC01341-202ENST00000421003 TRIM26Q12899 539 aaPredicted RBP22.1■■□□□ 1.13
LINC01341-202ENST00000421003 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
LINC01341-202ENST00000421003 CUX1P39880 1505 aa22.06■■□□□ 1.12
LINC01341-202ENST00000421003 TNIKQ9UKE5 1360 aa22.05■■□□□ 1.12
LINC01341-202ENST00000421003 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
LINC01341-202ENST00000421003 UBTFP17480 764 aaKnown RBP22■■□□□ 1.11
LINC01341-202ENST00000421003 CEP164Q9UPV0 1460 aa22■■□□□ 1.11
LINC01341-202ENST00000421003 CEP162Q5TB80 1403 aa21.97■■□□□ 1.11
LINC01341-202ENST00000421003 KIF21BO75037 1637 aa21.97■■□□□ 1.11
LINC01341-202ENST00000421003 PELP1Q8IZL8 1130 aaKnown RBP21.91■■□□□ 1.1
LINC01341-202ENST00000421003 FANCD2Q9BXW9 1451 aa21.89■■□□□ 1.09
LINC01341-202ENST00000421003 SCAF1Q9H7N4 1312 aaKnown RBP21.86■■□□□ 1.09
LINC01341-202ENST00000421003 KIF27Q86VH2 1401 aa21.86■■□□□ 1.09
LINC01341-202ENST00000421003 RAPGEF2Q9Y4G8 1499 aa21.85■■□□□ 1.09
LINC01341-202ENST00000421003 NESP48681 1621 aa21.83■■□□□ 1.09
LINC01341-202ENST00000421003 LAMC3Q9Y6N6 1575 aa21.81■■□□□ 1.08
LINC01341-202ENST00000421003 PRXQ9BXM0 1461 aa21.79■■□□□ 1.08
LINC01341-202ENST00000421003 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
LINC01341-202ENST00000421003 ERICH3Q5RHP9 1530 aa21.76■■□□□ 1.07
LINC01341-202ENST00000421003 DNAJC5BQ9UF47 199 aa21.76■■□□□ 1.07
LINC01341-202ENST00000421003 DNMBPQ6XZF7 1577 aa21.72■■□□□ 1.07
LINC01341-202ENST00000421003 CUX2O14529 1486 aa21.72■■□□□ 1.07
LINC01341-202ENST00000421003 CLIP1P30622 1438 aa21.71■■□□□ 1.07
LINC01341-202ENST00000421003 TOPBP1Q92547 1522 aa21.69■■□□□ 1.06
LINC01341-202ENST00000421003 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
LINC01341-202ENST00000421003 IGF1RP08069 1367 aa21.64■■□□□ 1.05
LINC01341-202ENST00000421003 POLA1P09884 1462 aaPredicted RBP21.61■■□□□ 1.05
LINC01341-202ENST00000421003 RANGAP1P46060 587 aaPredicted RBP21.59■■□□□ 1.05
LINC01341-202ENST00000421003 URB2Q14146 1524 aaKnown RBP21.58■■□□□ 1.05
LINC01341-202ENST00000421003 ABCA10Q8WWZ4 1543 aa21.58■■□□□ 1.04
LINC01341-202ENST00000421003 RAD54L2Q9Y4B4 1467 aa21.57■■□□□ 1.04
LINC01341-202ENST00000421003 TTBK1Q5TCY1 1321 aaPredicted RBP21.57■■□□□ 1.04
LINC01341-202ENST00000421003 VPS8Q8N3P4 1428 aa21.56■■□□□ 1.04
LINC01341-202ENST00000421003 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
LINC01341-202ENST00000421003 KIF21AQ7Z4S6 1674 aa21.51■■□□□ 1.03
LINC01341-202ENST00000421003 ZEB1P37275 1124 aaPredicted RBP21.49■■□□□ 1.03
LINC01341-202ENST00000421003 ARAP1Q96P48 1450 aa21.44■■□□□ 1.02
LINC01341-202ENST00000421003 APLP2Q06481 763 aa21.43■■□□□ 1.02
LINC01341-202ENST00000421003 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
LINC01341-202ENST00000421003 CUL7Q14999 1698 aa21.37■■□□□ 1.01
LINC01341-202ENST00000421003 ARHGAP35Q9NRY4 1499 aa21.36■■□□□ 1.01
LINC01341-202ENST00000421003 MRC2Q9UBG0 1479 aa21.36■■□□□ 1.01
LINC01341-202ENST00000421003 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
LINC01341-202ENST00000421003 ABCA5Q8WWZ7 1642 aa21.33■■□□□ 1.01
LINC01341-202ENST00000421003 GAPVD1Q14C86 1478 aa21.32■■□□□ 1
LINC01341-202ENST00000421003 TARBP1Q13395 1621 aaKnown RBP21.3■■□□□ 1
LINC01341-202ENST00000421003 NEUROD1Q13562 356 aa21.28■■□□□ 1
LINC01341-202ENST00000421003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.27■■□□□ 1
LINC01341-202ENST00000421003 ACIN1Q9UKV3 1341 aaKnown RBP21.24■□□□□ 0.99
LINC01341-202ENST00000421003 KANK4Q5T7N3 995 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms