Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPP1R3EQ9H7J1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3EQ9H7J1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3EQ9H7J1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3EQ9H7J1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.97■□□□□ 0.95
PPP1R3EQ9H7J1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3EQ9H7J1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.97■□□□□ 0.95
PPP1R3EQ9H7J1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3EQ9H7J1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3EQ9H7J1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.97■□□□□ 0.95
PPP1R3EQ9H7J1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PPP1R3EQ9H7J1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3EQ9H7J1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPP1R3EQ9H7J1 CLDN5-201ENST00000403084 2357 ntBASIC20.96■□□□□ 0.95
PPP1R3EQ9H7J1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PPP1R3EQ9H7J1 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.96■□□□□ 0.95
PPP1R3EQ9H7J1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.96■□□□□ 0.95
PPP1R3EQ9H7J1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP1R3EQ9H7J1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPP1R3EQ9H7J1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.96■□□□□ 0.95
PPP1R3EQ9H7J1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
PPP1R3EQ9H7J1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP1R3EQ9H7J1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP1R3EQ9H7J1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.95■□□□□ 0.94
PPP1R3EQ9H7J1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP1R3EQ9H7J1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.95■□□□□ 0.94
PPP1R3EQ9H7J1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
PPP1R3EQ9H7J1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPP1R3EQ9H7J1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP1R3EQ9H7J1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
PPP1R3EQ9H7J1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PPP1R3EQ9H7J1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3EQ9H7J1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3EQ9H7J1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3EQ9H7J1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3EQ9H7J1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.93■□□□□ 0.94
PPP1R3EQ9H7J1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PPP1R3EQ9H7J1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3EQ9H7J1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP1R3EQ9H7J1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP1R3EQ9H7J1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPP1R3EQ9H7J1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP1R3EQ9H7J1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.92■□□□□ 0.94
PPP1R3EQ9H7J1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP1R3EQ9H7J1 AC096887.2-201ENST00000623443 1957 ntBASIC20.92■□□□□ 0.94
PPP1R3EQ9H7J1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP1R3EQ9H7J1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP1R3EQ9H7J1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PPP1R3EQ9H7J1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PPP1R3EQ9H7J1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.91■□□□□ 0.94
PPP1R3EQ9H7J1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPP1R3EQ9H7J1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPP1R3EQ9H7J1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.9■□□□□ 0.94
PPP1R3EQ9H7J1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPP1R3EQ9H7J1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PPP1R3EQ9H7J1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.9■□□□□ 0.94
PPP1R3EQ9H7J1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PPP1R3EQ9H7J1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PPP1R3EQ9H7J1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PPP1R3EQ9H7J1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PPP1R3EQ9H7J1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PPP1R3EQ9H7J1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.89■□□□□ 0.94
PPP1R3EQ9H7J1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PPP1R3EQ9H7J1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
PPP1R3EQ9H7J1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.89■□□□□ 0.93
PPP1R3EQ9H7J1 AL157400.5-201ENST00000507624 621 ntBASIC20.89■□□□□ 0.93
PPP1R3EQ9H7J1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PPP1R3EQ9H7J1 AC060814.1-201ENST00000554326 538 ntBASIC20.89■□□□□ 0.93
PPP1R3EQ9H7J1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PPP1R3EQ9H7J1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPP1R3EQ9H7J1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PPP1R3EQ9H7J1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
PPP1R3EQ9H7J1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP1R3EQ9H7J1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP1R3EQ9H7J1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP1R3EQ9H7J1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.88■□□□□ 0.93
PPP1R3EQ9H7J1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.88■□□□□ 0.93
PPP1R3EQ9H7J1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP1R3EQ9H7J1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PPP1R3EQ9H7J1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP1R3EQ9H7J1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP1R3EQ9H7J1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PPP1R3EQ9H7J1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP1R3EQ9H7J1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.87■□□□□ 0.93
PPP1R3EQ9H7J1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms