Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC33.73■■■□□ 2.99
XRN1Q8IZH2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
XRN1Q8IZH2 AC133561.4-201ENST00000566112 224 ntBASIC33.72■■■□□ 2.99
XRN1Q8IZH2 LINC01003-201ENST00000564834 1764 ntBASIC33.72■■■□□ 2.99
XRN1Q8IZH2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
XRN1Q8IZH2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC33.71■■■□□ 2.99
XRN1Q8IZH2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC33.71■■■□□ 2.99
XRN1Q8IZH2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC33.71■■■□□ 2.99
XRN1Q8IZH2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
XRN1Q8IZH2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
XRN1Q8IZH2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC33.7■■■□□ 2.99
XRN1Q8IZH2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
XRN1Q8IZH2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC33.7■■■□□ 2.99
XRN1Q8IZH2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC33.69■■■□□ 2.98
XRN1Q8IZH2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC33.69■■■□□ 2.98
XRN1Q8IZH2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC33.69■■■□□ 2.98
XRN1Q8IZH2 AC005837.3-201ENST00000612163 286 ntBASIC33.69■■■□□ 2.98
XRN1Q8IZH2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC33.68■■■□□ 2.98
XRN1Q8IZH2 ZNRF2P3-201ENST00000424200 374 ntBASIC33.68■■■□□ 2.98
XRN1Q8IZH2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
XRN1Q8IZH2 CD72-202ENST00000378430 585 ntTSL 3 BASIC33.67■■■□□ 2.98
XRN1Q8IZH2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC33.67■■■□□ 2.98
XRN1Q8IZH2 GAK-223ENST00000628912 497 ntTSL 5 BASIC33.67■■■□□ 2.98
XRN1Q8IZH2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC33.66■■■□□ 2.98
XRN1Q8IZH2 AL356740.2-201ENST00000601559 647 ntBASIC33.66■■■□□ 2.98
XRN1Q8IZH2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC33.66■■■□□ 2.98
XRN1Q8IZH2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
XRN1Q8IZH2 AF131216.4-201ENST00000638924 1588 ntBASIC33.66■■■□□ 2.98
XRN1Q8IZH2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC33.65■■■□□ 2.98
XRN1Q8IZH2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC33.64■■■□□ 2.98
XRN1Q8IZH2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC33.64■■■□□ 2.98
XRN1Q8IZH2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC33.64■■■□□ 2.98
XRN1Q8IZH2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC33.64■■■□□ 2.98
XRN1Q8IZH2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
XRN1Q8IZH2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC33.63■■■□□ 2.97
XRN1Q8IZH2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
XRN1Q8IZH2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
XRN1Q8IZH2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
XRN1Q8IZH2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
XRN1Q8IZH2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
XRN1Q8IZH2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
XRN1Q8IZH2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
XRN1Q8IZH2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
XRN1Q8IZH2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
XRN1Q8IZH2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
XRN1Q8IZH2 AK3-203ENST00000447596 705 ntTSL 2 BASIC33.61■■■□□ 2.97
XRN1Q8IZH2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC33.61■■■□□ 2.97
XRN1Q8IZH2 AC026271.2-201ENST00000428091 497 ntBASIC33.6■■■□□ 2.97
XRN1Q8IZH2 AL031432.3-201ENST00000607698 485 ntBASIC33.59■■■□□ 2.97
XRN1Q8IZH2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC33.59■■■□□ 2.97
XRN1Q8IZH2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC33.59■■■□□ 2.97
XRN1Q8IZH2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC33.59■■■□□ 2.97
XRN1Q8IZH2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
XRN1Q8IZH2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC33.59■■■□□ 2.97
XRN1Q8IZH2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC33.59■■■□□ 2.97
XRN1Q8IZH2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
XRN1Q8IZH2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
XRN1Q8IZH2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC33.58■■■□□ 2.97
XRN1Q8IZH2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
XRN1Q8IZH2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
XRN1Q8IZH2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC33.57■■■□□ 2.96
XRN1Q8IZH2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC33.57■■■□□ 2.96
XRN1Q8IZH2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC33.57■■■□□ 2.96
XRN1Q8IZH2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
XRN1Q8IZH2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC33.57■■■□□ 2.96
XRN1Q8IZH2 AC106739.1-201ENST00000617035 715 ntBASIC33.57■■■□□ 2.96
XRN1Q8IZH2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC33.57■■■□□ 2.96
XRN1Q8IZH2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC33.56■■■□□ 2.96
XRN1Q8IZH2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
XRN1Q8IZH2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
XRN1Q8IZH2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC33.55■■■□□ 2.96
XRN1Q8IZH2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC33.55■■■□□ 2.96
XRN1Q8IZH2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC33.55■■■□□ 2.96
XRN1Q8IZH2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC33.55■■■□□ 2.96
XRN1Q8IZH2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC33.55■■■□□ 2.96
XRN1Q8IZH2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC33.54■■■□□ 2.96
XRN1Q8IZH2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC33.54■■■□□ 2.96
XRN1Q8IZH2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
XRN1Q8IZH2 SNX5-217ENST00000606557 1087 ntBASIC33.53■■■□□ 2.96
XRN1Q8IZH2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC33.53■■■□□ 2.96
XRN1Q8IZH2 SUDS3P1-201ENST00000505831 966 ntBASIC33.53■■■□□ 2.96
XRN1Q8IZH2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
XRN1Q8IZH2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC33.52■■■□□ 2.96
XRN1Q8IZH2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
XRN1Q8IZH2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC33.52■■■□□ 2.96
XRN1Q8IZH2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC33.52■■■□□ 2.96
XRN1Q8IZH2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC33.51■■■□□ 2.96
XRN1Q8IZH2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC33.51■■■□□ 2.96
XRN1Q8IZH2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC33.51■■■□□ 2.96
XRN1Q8IZH2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
XRN1Q8IZH2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
XRN1Q8IZH2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
XRN1Q8IZH2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC33.51■■■□□ 2.95
XRN1Q8IZH2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC33.5■■■□□ 2.95
XRN1Q8IZH2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC33.5■■■□□ 2.95
XRN1Q8IZH2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC33.5■■■□□ 2.95
XRN1Q8IZH2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
XRN1Q8IZH2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC33.5■■■□□ 2.95
XRN1Q8IZH2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC33.5■■■□□ 2.95
XRN1Q8IZH2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC33.5■■■□□ 2.95
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms